RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GRIN2CQ14957 1233 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 DCAF4L1Q3SXM0 396 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 ATF7IP2Q5U623 682 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 GLB1LQ6UWU2 654 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 MRPS27Q92552 414 aaKnown RBP28.32■■■□□ 2.12
TRIM28-204ENST00000594806 FAM161BQ96MY7 647 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 CASD1Q96PB1 797 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 EIF2AQ9BY44 585 aaKnown RBP28.32■■■□□ 2.12
TRIM28-204ENST00000594806 PDZD7Q9H5P4 517 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 IPPQ9Y573 584 aa28.32■■■□□ 2.12
TRIM28-204ENST00000594806 A0A1B0GVL5 298 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 GOLGA6L4A6NEF3 574 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 RB1P06400 928 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 ITGA4P13612 1032 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 NT5DC1Q5TFE4 455 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 TAS1R3Q7RTX0 852 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 CCDC65Q8IXS2 484 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 SMG8Q8ND04 991 aaKnown RBP28.31■■■□□ 2.12
TRIM28-204ENST00000594806 ACO2Q99798 780 aaKnown RBP28.31■■■□□ 2.12
TRIM28-204ENST00000594806 C7orf25Q9BPX7 421 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 PLVAPQ9BX97 442 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 TRIM9Q9C026 710 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 ZMYM2Q9UBW7 1377 aa28.31■■■□□ 2.12
TRIM28-204ENST00000594806 CARNS1A5YM72 827 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 K7ENM7 598 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 SYKP43405 635 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 GATMP50440 423 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 PAN2Q504Q3 1202 aaKnown RBP28.3■■■□□ 2.12
TRIM28-204ENST00000594806 CLLU1OSQ5K130 101 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 ZPBP2Q6X784 338 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 TMEM192Q8IY95 271 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 LRRC43Q8N309 656 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 ARNTL2Q8WYA1 636 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 FIZ1Q96SL8 496 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 RSAD1Q9HA92 442 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 AAASQ9NRG9 546 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 OLFML3Q9NRN5 406 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 KANSL3Q9P2N6 904 aa28.3■■■□□ 2.12
TRIM28-204ENST00000594806 TTLL13PA6NNM8 815 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 C5orf67F2Z3F1 127 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 NPTXRO95502 500 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 IDEP14735 1019 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 BMPR1AP36894 532 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 GTF2BQ00403 316 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 AGMOQ6ZNB7 445 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 FSIP1Q8NA03 581 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 HELQQ8TDG4 1101 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 HVCN1Q96D96 273 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 GUCD1Q96NT3 240 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 IPO9Q96P70 1041 aaKnown RBP28.29■■■□□ 2.12
TRIM28-204ENST00000594806 GAS2L1Q99501 681 aaPredicted RBP28.29■■■□□ 2.12
TRIM28-204ENST00000594806 CDX2Q99626 313 aaPredicted RBP28.29■■■□□ 2.12
TRIM28-204ENST00000594806 PANK4Q9NVE7 773 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 GIT1Q9Y2X7 761 aa28.29■■■□□ 2.12
TRIM28-204ENST00000594806 MRPL42Q9Y6G3 142 aaKnown RBP28.29■■■□□ 2.12
TRIM28-204ENST00000594806 OFD1O75665 1012 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 EDN1P05305 212 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 MYL1P05976 194 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 LINC00271P0C7V0 271 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 ALCAMQ13740 583 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 EPC2Q52LR7 807 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 HERC4Q5GLZ8 1057 aaPredicted RBP28.28■■■□□ 2.12
TRIM28-204ENST00000594806 ZNF720Q7Z2F6 126 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 SFR1Q86XK3 245 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 FBXO22Q8NEZ5 403 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 URGCPQ8TCY9 931 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 LPPQ93052 612 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 C17orf80Q9BSJ5 609 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 PRDM12Q9H4Q4 367 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 PTPRHQ9HD43 1115 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 TSHZ2Q9NRE2 1034 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 TBX20Q9UMR3 447 aa28.28■■■□□ 2.12
TRIM28-204ENST00000594806 INPPL1O15357 1258 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 ACTN4O43707 911 aaKnown RBP28.27■■■□□ 2.12
TRIM28-204ENST00000594806 TOM1L1O75674 476 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 NDUFA8P51970 172 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 NOMO2Q5JPE7 1267 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 CDR2LQ86X02 465 aaPredicted RBP28.27■■■□□ 2.12
TRIM28-204ENST00000594806 STAMQ92783 540 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 CCDC34Q96HJ3 373 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 TARS2Q9BW92 718 aaKnown RBP28.27■■■□□ 2.12
TRIM28-204ENST00000594806 MRPL44Q9H9J2 332 aaKnown RBP28.27■■■□□ 2.12
TRIM28-204ENST00000594806 CERS4Q9HA82 394 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 TYW1Q9NV66 732 aaKnown RBP28.27■■■□□ 2.12
TRIM28-204ENST00000594806 SERTAD1Q9UHV2 236 aa28.27■■■□□ 2.12
TRIM28-204ENST00000594806 SZT2Q5T011 3432 aa28.26■■■□□ 2.11
TRIM28-204ENST00000594806 PIGRP01833 764 aa28.26■■■□□ 2.11
TRIM28-204ENST00000594806 LAG3P18627 525 aa28.26■■■□□ 2.11
TRIM28-204ENST00000594806 EEF1DP3Q658K8 133 aa28.26■■■□□ 2.11
TRIM28-204ENST00000594806 P2RX5Q93086 422 aa28.26■■■□□ 2.11
TRIM28-204ENST00000594806 C11orf84Q9BUA3 381 aaPredicted RBP28.26■■■□□ 2.11
TRIM28-204ENST00000594806 NXF3Q9H4D5 531 aaKnown RBP28.26■■■□□ 2.11
TRIM28-204ENST00000594806 PVALEFA0A1B0GWK0 134 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 MEIS3P2A8K0S8 358 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 MCF2P10911 925 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 PROZP22891 400 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 NMT1P30419 496 aaKnown RBP28.25■■■□□ 2.11
TRIM28-204ENST00000594806 CTNNB1P35222 781 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 ASIC1P78348 528 aa28.25■■■□□ 2.11
TRIM28-204ENST00000594806 SPOUT1Q5T280 376 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms