RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MSANTD4Q8NCY6 345 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 ATP8B4Q8TF62 1192 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 HNRNPLLQ8WVV9 542 aaKnown RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 BSNDQ8WZ55 320 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 PCYT2Q99447 389 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 GPR20Q99678 358 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 SH2D3AQ9BRG2 576 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
VPS25-203ENST00000589520 TMEM117Q9H0C3 514 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 VTA1Q9NP79 307 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 NENFQ9UMX5 172 aa11.26□□□□□ -0.61
VPS25-203ENST00000589520 PTPRFP10586 1907 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 ADCY3O60266 1144 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 HBP1O60381 514 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 MOCS3O95396 460 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 GLRA2P23416 452 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 GCLMP48507 274 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 POU5F1BQ06416 359 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 CYP24A1Q07973 514 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 PPP3CAQ08209 521 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 GRM1Q13255 1194 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TFDP1Q14186 410 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 NAA30Q147X3 362 aaPredicted RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 PSMD6Q15008 389 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 ZNF484Q5JVG2 852 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 TRMT1LQ7Z2T5 733 aaKnown RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 ZBTB8OSQ8IWT0 167 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 MSL3Q8N5Y2 521 aaKnown RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 FBXL13Q8NEE6 735 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 SLC30A5Q8TAD4 765 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 GLG1Q92896 1179 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 FNBP1Q96RU3 617 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 GBA2Q9HCG7 927 aaPredicted RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 UBE2TQ9NPD8 197 aaPredicted RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 RAB20Q9NX57 234 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.25□□□□□ -0.61
VPS25-203ENST00000589520 RAB21Q9UL25 225 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 DUSP10Q9Y6W6 482 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 IVNS1ABPQ9Y6Y0 642 aa11.25□□□□□ -0.61
VPS25-203ENST00000589520 V9GYY5 206 aaPredicted RBP11.25□□□□□ -0.61
VPS25-203ENST00000589520 GRID2IPA4D2P6 1211 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 PDHXO00330 501 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 TMEM253P0C7T8 217 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 TXNP10599 105 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 GZMAP12544 262 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 KLRC1P26715 233 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 GJA5P36382 358 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 BPIFB4P59827 614 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 APBA1Q02410 837 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 GCNT1Q02742 428 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 FSTL1Q12841 308 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 CLUL1Q15846 466 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 LY6KQ17RY6 165 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 GLE1Q53GS7 698 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 C1orf220Q5T0J3 134 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 PPP1R2P3Q6NXS1 205 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 FBXO38Q6PIJ6 1188 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 CBWD2Q8IUF1 395 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 CAGE1Q8TC20 777 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 PBKQ96KB5 322 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 FGD4Q96M96 766 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 PARD6BQ9BYG5 372 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 PUF60Q9UHX1 559 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
VPS25-203ENST00000589520 MYH11P35749 1972 aa11.24□□□□□ -0.61
VPS25-203ENST00000589520 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CCL15-CCL14A0A0B4J2E2 113 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ANKRD62A6NC57 917 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 LRRIQ3A6PVS8 624 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms