RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CLTCL1P53675 1640 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 SHANK2Q9UPX8 1470 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 EHBP1L1Q8N3D4 1523 aa6.71□□□□□ -1.34
SMAD4-203ENST00000585448 MSH6P52701 1360 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 PTPRKQ15262 1439 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 GOLGA8KD6RF30 607 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CYP27B1O15528 508 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 PRC1O43663 620 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SMARCA5O60264 1052 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 KDM1AO60341 852 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 BUB1BO60566 1050 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SEMA7AO75326 666 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 LINGO3P0C6S8 592 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 KIF5BP33176 963 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 HSPA4P34932 840 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CCT6AP40227 531 aaKnown RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 MAGEA10P43363 369 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 INHBCP55103 352 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 INAQ16352 499 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 MLANAQ16655 118 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 PRSS53Q2L4Q9 553 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SGSM1Q2NKQ1 1148 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 ADGRF1Q5T601 910 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 PAQR3Q6TCH7 311 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SRGAP1Q7Z6B7 1085 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CPNE8Q86YQ8 564 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC13Q8IYE1 715 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CEP57L1Q8IYX8 460 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 FUKQ8N0W3 1084 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 RASSF8Q8NHQ8 419 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SMARCC2Q8TAQ2 1214 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 DYDC1Q8WWB3 177 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 MAIP1Q8WWC4 291 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 ZNF653Q96CK0 615 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 OPTNQ96CV9 577 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 CLIC6Q96NY7 704 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 UIMC1Q96RL1 719 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 LRRCC1Q9C099 1032 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 VCX3BQ9H321 246 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 NSUN3Q9H649 340 aaKnown RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 VCX3AQ9NNX9 186 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 WDR35Q9P2L0 1181 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 TMEFF2Q9UIK5 374 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SNAPC4Q5SXM2 1469 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 SH3TC1Q8TE82 1336 aa6.7□□□□□ -1.34
SMAD4-203ENST00000585448 TEX51A0A1B0GUA7 166 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 CCDC85CA6NKD9 419 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 LRRIQ3A6PVS8 624 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 DIAPH1O60610 1272 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 RPSAP08865 295 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 DBHP09172 617 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ZSCAN22P10073 491 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 GHRP10912 638 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 SFPQP23246 707 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MAPKAPK2P49137 400 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 GNAQP50148 359 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 SCNN1BP51168 640 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 RPL11P62913 178 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MRPS35P82673 323 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 AKAP17AQ02040 695 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 EIF2B5Q13144 721 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 XRCC4Q13426 336 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 BTG3Q14201 252 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 E2F5Q15329 346 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 CNGA3Q16281 694 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ANO6Q4KMQ2 910 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 PABPC1LQ4VXU2 614 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 CMPK2Q5EBM0 449 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ZFYVE27Q5T4F4 411 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 STYK1Q6J9G0 422 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 NAA16Q6N069 864 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 TRIM65Q6PJ69 517 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 RPAP2Q8IXW5 612 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 SYCP3Q8IZU3 236 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 LRRC43Q8N309 656 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ARHGAP18Q8N392 663 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 LZTR1Q8N653 840 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MIGA1Q8NAN2 632 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 RCBTB1Q8NDN9 531 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 NSMCE1Q8WV22 266 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 TEKT4Q8WW24 435 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 NACC2Q96BF6 587 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 ZMAT2Q96NC0 199 aaKnown RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 PPP1R16BQ96T49 567 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 DNAJC7Q99615 494 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 TNMDQ9H2S6 317 aa6.69□□□□□ -1.34
SMAD4-203ENST00000585448 DMAP1Q9NPF5 467 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-203ENST00000585448 AATFQ9NY61 560 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms