RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 CDC6Q99741 560 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 ZKSCAN3Q9BRR0 538 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 TCP11L1Q9NUJ3 509 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 KLHL11Q9NVR0 708 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 CLIC5Q9NZA1 410 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 ZFATQ9P243 1243 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 IP6K2Q9UHH9 426 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 NOL7Q9UMY1 257 aaKnown RBP5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 ANKRD6Q9Y2G4 727 aa5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 LUC7L2Q9Y383 392 aaKnown RBP5.54□□□□□ -1.52
GAPLINC-202ENST00000579007 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 C9IYK1 514 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 AGRPO00253 132 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 PPP1R11O60927 126 aaPredicted RBP5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 CABYRO75952 493 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 MMP3P08254 477 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 CCT5P48643 541 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 ARHGAP1Q07960 439 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 BIRC3Q13489 604 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 SLC9A5Q14940 896 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 GPNMBQ14956 572 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 PPP2R5BQ15173 497 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 CDC37Q16543 378 aaPredicted RBP5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 USH1GQ495M9 461 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 TJAP1Q5JTD0 557 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 AKNAD1Q5T1N1 836 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 GPR158Q5T848 1215 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 PPP1R26Q5T8A7 1209 aaPredicted RBP5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 VHLLQ6RSH7 139 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 RUFY4Q6ZNE9 571 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 KIAA1211Q6ZU35 1233 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 CCNJLQ8IV13 435 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 SCUBE1Q8IWY4 988 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 CCDC116Q8IYX3 515 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 ZSCAN1Q8NBB4 408 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 WNT8BQ93098 351 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 TTC14Q96N46 770 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 TTC1Q99614 292 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 WDR11Q9BZH6 1224 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 SLC13A1Q9BZW2 595 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 AP5M1Q9H0R1 490 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 MUC3BQ9H195 1237 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 ZDHHC3Q9NYG2 299 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 THEGQ9P2T0 379 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 PHTF1Q9UMS5 762 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 USP20Q9Y2K6 914 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 Q9Y3F1 56 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 MYO15AQ9UKN7 3530 aa5.53□□□□□ -1.52
GAPLINC-202ENST00000579007 DMDP11532 3685 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 FNDC1Q4ZHG4 1894 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TRBV23-1A0A0A0MS06 115 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 DYTNA2CJ06 578 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 B4E1Z4 1266 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TLL1O43897 1013 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 IGHDP01880 384 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 PGRP06401 933 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 CA3P07451 260 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 GSPT1P15170 499 aaKnown RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 ITPKAP23677 461 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 GRM5P41594 1212 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 CPT1AP50416 773 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 COPS2P61201 443 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 RAB30Q15771 203 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 QRICH1Q2TAL8 776 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TRIM61Q5EBN2 209 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 KRT40Q6A162 431 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 IQSEC1Q6DN90 963 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 GDF6Q6KF10 455 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 MZT2AQ6P582 158 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 PKN3Q6P5Z2 889 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 C1orf228Q6PIY5 440 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TMCO2Q7Z6W1 182 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 DEFB128Q7Z7B8 93 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TPH2Q8IWU9 490 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 VPS37AQ8NEZ2 397 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 IL31RAQ8NI17 732 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 SYTL5Q8TDW5 730 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 KAT2BQ92831 832 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 CLIP3Q96DZ5 547 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 TNIP3Q96KP6 325 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 ZSCAN10Q96SZ4 725 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 GAS2L1Q99501 681 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 MTG1Q9BT17 334 aaPredicted RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 IFT22Q9H7X7 185 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 LATS2Q9NRM7 1088 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 PGPEP1Q9NXJ5 209 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 ADD3Q9UEY8 706 aaKnown RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 RAPGEFL1Q9UHV5 662 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 CYP8B1Q9UNU6 501 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 SAMM50Q9Y512 469 aa5.52□□□□□ -1.53
GAPLINC-202ENST00000579007 PCDHB5Q9Y5E4 795 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms