RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ASNSP08243 561 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 NCAPHQ15003 741 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ADRM1Q16186 407 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 KIF19Q2TAC6 998 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 BTNL9Q6UXG8 535 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 USP38Q8NB14 1042 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 GSG1L2A8MUP6 293 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 E9PMD0 336 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CD58P19256 250 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ROR1Q01973 937 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ITIH4Q14624 930 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 HEATR6Q6AI08 1181 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 SLC26A7Q8TE54 656 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 DYNLL2Q96FJ2 89 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TRIM62Q9BVG3 475 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 SLC9A2Q9UBY0 812 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 SUFUQ9UMX1 484 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 HNRNPRO43390 633 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 E2F6O75461 281 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ESRRBO95718 433 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CYLC2Q14093 348 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 RC3H1Q5TC82 1133 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 RNF169Q8NCN4 708 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 HIPK4Q8NE63 616 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ERP44Q9BS26 406 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 L1RE1Q9UN81 338 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 USP31Q70CQ4 1352 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TRIM66O15016 1216 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CLDN3O15551 220 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ABCE1P61221 599 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 INPP5AQ14642 412 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 STILQ15468 1287 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 UGP2Q16851 508 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 HEMGNQ9BXL5 484 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 VPS11Q9H270 941 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ARHGEF40Q8TER5 1519 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TMEM247A6NEH6 219 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CIITAP33076 1130 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 KPNB1Q14974 876 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 LLGL1Q15334 1064 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 EPHA7Q15375 998 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 MTERF2Q49AM1 385 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TMTC4Q5T4D3 741 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 DCLK2Q8N568 766 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CHP1Q99653 195 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 PLA2G12BQ9BX93 195 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ZWILCHQ9H900 591 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 TBC1D23Q9NUY8 699 aa11.38□□□□□ -0.59
SEC22B-201ENST00000578049 GEMIN8Q9NWZ8 242 aaKnown RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 SCHIP1Q9P0W5 487 aaPredicted RBP11.38□□□□□ -0.59
SEC22B-201ENST00000578049 CASP1P29466 404 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 CENPCQ03188 943 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 KCNB2Q92953 911 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 SERPINB12Q96P63 405 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 SMYD3Q9H7B4 428 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 STX18Q9P2W9 335 aaKnown RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 PLAGL2Q9UPG8 496 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 SYNJ2BP-COX16A0A087WUM0 186 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 POTECB2RU33 542 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 O00370 1275 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 FNTAP49354 379 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 TRAPPC11Q7Z392 1133 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 NDUFAF2Q8N183 169 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 IL17RAQ96F46 866 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 ASPSCR1Q9BZE9 553 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 IRX2Q9BZI1 471 aaPredicted RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 COX16Q9P0S2 106 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 STAT3P40763 770 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 MAPK6Q16659 721 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 TSSK1BQ9BXA7 367 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 PKD2L2Q9NZM6 624 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 TYK2P29597 1187 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 FBXW10Q5XX13 1052 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 TEX12Q9BXU0 123 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 SLC40A1Q9NP59 571 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 AKT3Q9Y243 479 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 GYPCP04921 128 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms