RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 KRT12Q99456 494 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 PACSIN1Q9BY11 444 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 GLT8D2Q9H1C3 349 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 RBM12Q9NTZ6 932 aaKnown RBP5.84□□□□□ -1.48
VAPA-203ENST00000577539 FAM184BQ9ULE4 1060 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 IGKV6D-41A0A0C4DH26 115 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TARSL2A2RTX5 802 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 KCNK3O14649 394 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 GIPC1O14908 333 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 HSF2BPO75031 334 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 RGS20O76081 388 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 NDUFB10O96000 172 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 MYBP10242 640 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 NPR1P16066 1061 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 BDNFP23560 247 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 ALDH1B1P30837 517 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 HNRNPH3P31942 346 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 CASP5P51878 434 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 CTTNQ14247 550 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 EXOC3L4Q17RC7 722 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 FOXR1Q6PIV2 292 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 MAEAQ7L5Y9 396 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 MYCT1Q8N699 235 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 REEP2Q9BRK0 252 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TLR10Q9BXR5 811 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 NIFKQ9BYG3 293 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 ELP3Q9H9T3 547 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 EPB41L5Q9HCM4 733 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 LAMB2P55268 1798 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 COL22A1Q8NFW1 1626 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 CEP104O60308 925 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TLR2O60603 784 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 HEXIM1O94992 359 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 USP11P51784 963 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 KCTD19Q17RG1 926 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 ZFYVE27Q5T4F4 411 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 SYDE2Q5VT97 1194 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 HHIPL2Q6UWX4 724 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TRIM59Q8IWR1 403 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 RAVER1Q8IY67 606 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 CELF2-AS1Q8N7Q2 184 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 MKL1Q969V6 931 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 BCAS3Q9H6U6 928 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 GGT7Q9UJ14 662 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 KIAA1551Q9HCM1 1747 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 CLRN2A0PK11 232 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 ZSCAN5CA6NGD5 496 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 TCP10L2B9ZVM9 353 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 DDX39AO00148 427 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 CALUO43852 315 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 AFPP02771 609 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 IVLP07476 585 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 EPB41P11171 864 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 BMP3P12645 472 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 ACPPP15309 386 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 RPS6KA1Q15418 735 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 COBLL1Q53SF7 1204 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 KLHDC7AQ5VTJ3 777 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 KCTD16Q68DU8 428 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 DCAF4Q8WV16 495 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 EDEM3Q9BZQ6 932 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 SUV39H2Q9H5I1 410 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 DNAJC18Q9H819 358 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TRPC5Q9UL62 973 aaPredicted RBP5.83□□□□□ -1.48
VAPA-203ENST00000577539 NFU1Q9UMS0 254 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 ZNF232Q9UNY5 417 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 TLR6Q9Y2C9 796 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 RABGAP1Q9Y3P9 1069 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 MYH10P35580 1976 aa5.83□□□□□ -1.48
VAPA-203ENST00000577539 ABCB11O95342 1321 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 NOL4O94818 638 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 SYF2O95926 243 aaKnown RBP5.82□□□□□ -1.48
VAPA-203ENST00000577539 RPL13P26373 211 aaKnown RBP5.82□□□□□ -1.48
VAPA-203ENST00000577539 CASP4P49662 377 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 CYP2J2P51589 502 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 SLC18A3Q16572 532 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 KNOP1Q1ED39 458 aaKnown RBP5.82□□□□□ -1.48
VAPA-203ENST00000577539 ZCWPW2Q504Y3 356 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 CFAP58Q5T655 872 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 HGSNATQ68CP4 663 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 GJB7Q6PEY0 223 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 MAATS1Q7Z4T9 603 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 VPS36Q86VN1 386 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 KSR1Q8IVT5 923 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 IFT20Q8IY31 132 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 MMGT1Q8N4V1 131 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 PHC3Q8NDX5 983 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 U2AF1L4Q8WU68 220 aaKnown RBP5.82□□□□□ -1.48
VAPA-203ENST00000577539 IKZF4Q9H2S9 585 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 PSD3Q9NYI0 1048 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 TMOD2Q9NZR1 351 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 TNRC6CQ9HCJ0 1690 aaKnown RBP5.82□□□□□ -1.48
VAPA-203ENST00000577539 A0A1W2PP55 124 aa5.82□□□□□ -1.48
VAPA-203ENST00000577539 FAM86B1E9PN63 330 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms