RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 DMP1Q13316 513 aaPredicted RBP29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 TMEM132AQ24JP5 1023 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 SLC39A11Q8N1S5 342 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 RASSF8Q8NHQ8 419 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 EPSTI1Q96J88 318 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 CCSER1Q9C0I3 900 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 GBP3Q9H0R5 595 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 PDZD7Q9H5P4 517 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 TLR9Q9NR96 1032 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 BLOC1S4Q9NUP1 217 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 KANSL3Q9P2N6 904 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 PUF60Q9UHX1 559 aaKnown RBP29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 LZTS1Q9Y250 596 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 PCDHGC5Q9Y5F6 944 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 VCANP13611 3396 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 NT5C1B-RDH14C9J2C7 533 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 N4BP3O15049 544 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 ERVFC1P60507 584 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 KRT17Q04695 432 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 HYAL1Q12794 435 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 SLC39A14Q15043 492 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 FOXD4L5Q5VV16 416 aaPredicted RBP29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 USP49Q70CQ1 688 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 ZNF280BQ86YH2 543 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 HACE1Q8IYU2 909 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 MICAL1Q8TDZ2 1067 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 FOXD4L4Q8WXT5 416 aaPredicted RBP29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 CLIC6Q96NY7 704 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 GAD1Q99259 594 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 C17orf75Q9HAS0 396 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 KCND2Q9NZV8 630 aa29.1■■■□□ 2.25
PPP4R1-204ENST00000577393 K7ERI5 159 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 POMCP01189 267 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 PDIA4P13667 645 aaKnown RBP29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 KCNQ1P51787 676 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 COL19A1Q14993 1142 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 ARSHQ5FYA8 562 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 ADGRD2Q7Z7M1 963 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 PABPC5Q96DU9 382 aaKnown RBP29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 KMT5AQ9NQR1 393 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 DNAJB4Q9UDY4 337 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 GIT1Q9Y2X7 761 aa29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 MORC2Q9Y6X9 1032 aaPredicted RBP29.09■■■□□ 2.25
PPP4R1-204ENST00000577393 NPHP3-ACAD11A0A0J9YXS1 232 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 ARL5CA6NH57 179 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 NCK2O43639 380 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 B4GALT3O60512 393 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 DDHD2O94830 711 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 GALTP07902 379 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 KCNA5P22460 613 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 AKAP5P24588 427 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 GTF2F1P35269 517 aaKnown RBP eCLIP29.08■■■□□ 2.258e-7■■□□□ 14.3
PPP4R1-204ENST00000577393 MLH1P40692 756 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 NASPP49321 788 aaPredicted RBP29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 DHX8Q14562 1220 aaKnown RBP29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 NT5DC1Q5TFE4 455 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 RAD54LQ92698 747 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 SYMPKQ92797 1274 aaKnown RBP29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 PPP2R3CQ969Q6 453 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 IGFLR1Q9H665 355 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 ARHGAP28Q9P2N2 729 aa29.08■■■□□ 2.25
PPP4R1-204ENST00000577393 FSCN2O14926 492 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 INPPL1O15357 1258 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 ZSCAN22P10073 491 aaPredicted RBP29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 BMP1P13497 986 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 MCM6Q14566 821 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 EEF1DP3Q658K8 133 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 EP400NLQ6ZTU2 488 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 GPBP1Q86WP2 473 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 ZFP42Q96MM3 310 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 FAM193BQ96PV7 902 aaPredicted RBP29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 TMEM134Q9H6X4 195 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 MIOSQ9NXC5 875 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 CLDND1Q9NY35 253 aa29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 RBM19Q9Y4C8 960 aaKnown RBP29.07■■■□□ 2.24
PPP4R1-204ENST00000577393 PHLPP2Q6ZVD8 1323 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 CARNS1A5YM72 827 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 SLC16A4O15374 487 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 PLS3P13797 630 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 SLC11A1P49279 550 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 CACNB1Q02641 598 aaPredicted RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 PDE12Q6L8Q7 609 aaKnown RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 TMEM173Q86WV6 379 aaPredicted RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 TMEM169Q96HH4 297 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 ZNF396Q96N95 335 aaPredicted RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 ADPGKQ9BRR6 497 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 NTPCRQ9BSD7 190 aaKnown RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 TFIP11Q9UBB9 837 aaKnown RBP29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 PARP2Q9UGN5 583 aa29.06■■■□□ 2.24
PPP4R1-204ENST00000577393 SCNN1GP51170 649 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 STK38Q15208 465 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 CTC1Q2NKJ3 1217 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 ATF7IP2Q5U623 682 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 TAS1R3Q7RTX0 852 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 RBM23Q86U06 439 aaKnown RBP29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 KRI1Q8N9T8 703 aaKnown RBP29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 LINC00301Q8NCQ3 95 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 SPIRE2Q8WWL2 714 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 IGSF21Q96ID5 467 aa29.05■■■□□ 2.24
PPP4R1-204ENST00000577393 TCF25Q9BQ70 676 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms