RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-211ENST00000568373 CYP24A1Q07973 514 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
SMPD3-211ENST00000568373 GPD1LQ8N335 351 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 LRRC57Q8N9N7 239 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 SLC7A3Q8WY07 619 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 TMEM143Q96AN5 459 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 CEP89Q96ST8 783 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 RBPJLQ9UBG7 517 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 COQ4Q9Y3A0 265 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 SCP2P22307 547 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 GTF2H1P32780 548 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 GALCP54803 685 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 ENPEPQ07075 957 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 METTL7BQ6UX53 244 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 MPHOSPH6Q99547 160 aaKnown RBP19.63■□□□□ 0.73
SMPD3-211ENST00000568373 TNFAIP3P21580 790 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 ARL2P36404 184 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 NAMPTP43490 491 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 FAM160B1Q5W0V3 765 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 CCDC70Q6NSX1 233 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 EEPD1Q7L9B9 569 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 TPCN2Q8NHX9 752 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 ASAP3Q8TDY4 903 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 AFAP1L1Q8TED9 768 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 FGD4Q96M96 766 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 POP1Q99575 1024 aaKnown RBP19.63■□□□□ 0.73
SMPD3-211ENST00000568373 SMARCAL1Q9NZC9 954 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 EHD2Q9NZN4 543 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 L1RE1Q9UN81 338 aa19.63■□□□□ 0.73
SMPD3-211ENST00000568373 PACSIN2Q9UNF0 486 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-211ENST00000568373 MAP2K7O14733 419 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 GGPS1O95749 300 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 OSBPP22059 807 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 GLRA2P23416 452 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 RFC5P40937 340 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 LIG4P49917 911 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 STAT5BP51692 787 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 STRN3Q13033 797 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 TARBP2Q15633 366 aaKnown RBP19.62■□□□□ 0.73
SMPD3-211ENST00000568373 ARMC9Q7Z3E5 817 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 SEMA4DQ92854 862 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 AGPAT1Q99943 283 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 NRBP2Q9NSY0 501 aa19.62■□□□□ 0.73
SMPD3-211ENST00000568373 PGK2P07205 417 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 TMEM253P0C7T8 217 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 GPC3P51654 580 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 Q3C1V9 767 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 GLIPR1L2Q4G1C9 344 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 LMBR1Q8WVP7 490 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 SEPT1Q8WYJ6 367 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 MS4A14Q96JA4 679 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 FAM213AQ9BRX8 229 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 NCANO14594 1321 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 DNAJC25-GNG10A0A024R161 153 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 TCF7P36402 384 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-211ENST00000568373 DNA2P51530 1060 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 RPS6KA1Q15418 735 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 LY6KQ17RY6 165 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 GPAT2Q6NUI2 795 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 HDXQ7Z353 690 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 PPM1KQ8N3J5 372 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 FBXL13Q8NEE6 735 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 DEPTORQ8TB45 409 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 KAT5Q92993 513 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 KIAA1586Q9HCI6 787 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 TOPORSQ9NS56 1045 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-211ENST00000568373 SIP14410 1827 aa19.61■□□□□ 0.73
SMPD3-211ENST00000568373 LRRIQ4A6NIV6 560 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 ZNF233A6NK53 670 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 TMCO5BA8MYB1 307 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 TULP1O00294 542 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-211ENST00000568373 CES2O00748 559 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 EXTL3O43909 919 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 KCTD2Q14681 263 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 KCNV1Q6PIU1 500 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 SLFN11Q7Z7L1 901 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 FAM71AQ8IYT1 594 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 CTNNBL1Q8WYA6 563 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-211ENST00000568373 RFFLQ8WZ73 363 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 KREMEN1Q96MU8 473 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 MMP19Q99542 508 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 SEPT11Q9NVA2 429 aaKnown RBP19.6■□□□□ 0.73
SMPD3-211ENST00000568373 STYXL1Q9Y6J8 313 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 KIF4AO95239 1232 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 ARIH2O95376 493 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 PIGRP01833 764 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 DLATP10515 647 aaKnown RBP19.6■□□□□ 0.73
SMPD3-211ENST00000568373 MFAP3P55082 362 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 SV2AQ7L0J3 742 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 PALB2Q86YC2 1186 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 TAS1R2Q8TE23 839 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 SLC20A1Q8WUM9 679 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 TAF4BQ92750 862 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 GOLPH3Q9H4A6 298 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 RAB20Q9NX57 234 aa19.6■□□□□ 0.73
SMPD3-211ENST00000568373 KIAA0391O15091 583 aaKnown RBP19.59■□□□□ 0.73
SMPD3-211ENST00000568373 LDLRAD1Q5T700 205 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 SYCE1Q8N0S2 351 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms