RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SEZ6LQ9BYH1 1024 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 SH2B1Q9NRF2 756 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 FEM1BQ9UK73 627 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 KIAA1217Q5T5P2 1943 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 TTC3P53804 2025 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 PLA2G6O60733 806 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 ARIH2O95376 493 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 LMNAP02545 664 aaKnown RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 WEE2P0C1S8 567 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 IFNAR1P17181 557 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 IBSPP21815 317 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 BMPR1AP36894 532 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 IKQ13123 557 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 NPY5RQ15761 445 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 FOXD4L6Q3SYB3 417 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 USH1GQ495M9 461 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 ASPRV1Q53RT3 343 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 WWC2Q6AWC2 1192 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 FOXD4L3Q6VB84 417 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 FIBCD1Q8N539 461 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 TSEN2Q8NCE0 465 aaKnown RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 SMRP1Q8NCR6 262 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 CYP2W1Q8TAV3 490 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 FEZF2Q8TBJ5 459 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 CHURC1Q8WUH1 139 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 AFG1LQ8WV93 481 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 KAT2BQ92831 832 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 TOP1MTQ969P6 601 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 MAP3K14Q99558 947 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 RANBP17Q9H2T7 1088 aaKnown RBP7.02□□□□□ -1.29
UBFD1-204ENST00000565634 MFSD1Q9H3U5 465 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 SH2D4AQ9H788 454 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 ACAD9Q9H845 621 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 SLC38A10Q9HBR0 1119 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 TPSG1Q9NRR2 321 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 DLL3Q9NYJ7 618 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 KCNJ14Q9UNX9 436 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 Q9Y3F1 56 aa7.02□□□□□ -1.29
UBFD1-204ENST00000565634 DOCK6Q96HP0 2047 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 NID2Q14112 1375 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PNMA6FA0A0J9YX94 578 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PTPDC1A2A3K4 754 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 NFIBO00712 420 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 NCK2O43639 380 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 EIF5BO60841 1220 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 LINC00271P0C7V0 271 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 NID1P14543 1247 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 THPOP40225 353 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 CPT1AP50416 773 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 STAT2P52630 851 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 SSRP1Q08945 709 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PKP1Q13835 747 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 BAATQ14032 418 aaPredicted RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 ACAP1Q15027 740 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 ANKRD1Q15327 319 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 CDC37Q16543 378 aaPredicted RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 TRIM71Q2Q1W2 868 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PRRT3Q5FWE3 981 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 EARS2Q5JPH6 523 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 GPATCH4Q5T3I0 446 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 LLGL2Q6P1M3 1020 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 SYNE3Q6ZMZ3 975 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 VN1R2Q8NFZ6 395 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 CTCFLQ8NI51 663 aaPredicted RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 CAGE1Q8TC20 777 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 MICAL1Q8TDZ2 1067 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 ZSCAN31Q96LW9 406 aaPredicted RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 ASB16Q96NS5 453 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 SPZ1Q9BXG8 430 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 IFIH1Q9BYX4 1025 aaKnown RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 TMEM260Q9NX78 707 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 CYP39A1Q9NYL5 469 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 VPS54Q9P1Q0 977 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 COL20A1Q9P218 1284 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 ORC3Q9UBD5 711 aaPredicted RBP7.01□□□□□ -1.29
UBFD1-204ENST00000565634 SYNPO2Q9UMS6 1093 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 PLAGL2Q9UPG8 496 aa7.01□□□□□ -1.29
UBFD1-204ENST00000565634 SPDYE3A6NKU9 549 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 ATP2A1O14983 1001 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 ZBTB5O15062 677 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 DHX16O60231 1041 aaKnown RBP7□□□□□ -1.29
UBFD1-204ENST00000565634 ITGB1P05556 798 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 CTSHP09668 335 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 CALM1P0DP23 149 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 CALM2P0DP24 149 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 CALM3P0DP25 149 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 TXNP10599 105 aaKnown RBP7□□□□□ -1.29
UBFD1-204ENST00000565634 NPR3P17342 541 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 CALML3P27482 149 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 GJB2P29033 226 aa7□□□□□ -1.29
UBFD1-204ENST00000565634 HOXA13P31271 388 aaPredicted RBP7□□□□□ -1.29
UBFD1-204ENST00000565634 ADH7P40394 386 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms