RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 R3HDMLQ9H3Y0 253 aa7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 RIC8BQ9NVN3 520 aa7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 CNOT7Q9UIV1 285 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 TELO2Q9Y4R8 837 aa7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 KIF7Q2M1P5 1343 aa7.47□□□□□ -1.21
HERPUD1-208ENST00000563911 TCRBV5S2A0A599 114 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 OR14I1A6ND48 311 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 PTPN1P18031 435 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 EPHA5P54756 1037 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 ITKQ08881 620 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 TMEM62Q0P6H9 643 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 NOGQ13253 232 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 SLC9A5Q14940 896 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 RGMBQ6NW40 437 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 CBLL1Q75N03 491 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 COG1Q8WTW3 980 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 PUS7LQ9H0K6 701 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 TOMM22Q9NS69 142 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 SCAF8Q9UPN6 1271 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 SPO11Q9Y5K1 396 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 HCFC2Q9Y5Z7 792 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 ABCC4O15439 1325 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.22
HERPUD1-208ENST00000563911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ERVV-1B6SEH8 477 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 DVL2O14641 736 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 BUB1BO60566 1050 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ULK1O75385 1050 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 S100BP04271 92 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 GLI1P08151 1106 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 GJA4P35212 333 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 MAPKAPK2P49137 400 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 KIAA2012Q0VF49 1180 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 SEC23AQ15436 765 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 SLC10A5Q5PT55 438 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ZC3H14Q6PJT7 736 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 MOB2Q70IA6 237 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 DLG3Q92796 817 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 RPGRQ92834 1020 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 SLC5A5Q92911 643 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 MTMR8Q96EF0 704 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 RBM17Q96I25 401 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ELF4Q99607 663 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 THUMPD2Q9BTF0 503 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 IRF2BPLQ9H1B7 796 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 METTL14Q9HCE5 456 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 ACSS2Q9NR19 701 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 KCNH7Q9NS40 1196 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 KLHL14Q9P2G3 628 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 RRP7AQ9Y3A4 280 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 BRCA2P51587 3418 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 SZT2Q5T011 3432 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 MAP3K15Q6ZN16 1313 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 NUP98P52948 1817 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 TAF1P21675 1872 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 HTTP42858 3142 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 RTL9Q8NET4 1388 aa7.45□□□□□ -1.22
HERPUD1-208ENST00000563911 PSMD14O00487 310 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 TGM5O43548 720 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 ANXA1P04083 346 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 MYL6BP14649 208 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 MTMR1Q13613 665 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 PROSER3Q2NL68 480 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 BROXQ5VW32 411 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 CTU1Q7Z7A3 348 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 NBPF11Q86T75 865 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 SP8Q8IXZ3 490 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 CNTD1Q8N815 330 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 TSPAN17Q96FV3 270 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 YIPF4Q9BSR8 244 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 CCDC8Q9H0W5 538 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 BCAS3Q9H6U6 928 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 GBA2Q9HCG7 927 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
HERPUD1-208ENST00000563911 POLR2AP24928 1970 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 PRAMEF25A6NGN4 478 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 ABLIM1O14639 778 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 PRKD3O94806 890 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 CYP17A1P05093 508 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 PTX3P26022 381 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 EIF4A1P60842 406 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 CAP1Q01518 475 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 FAPQ12884 760 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 CC2D1AQ6P1N0 951 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 IRF2BP1Q8IU81 584 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 NYXQ9GZU5 481 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 POLLQ9UGP5 575 aa7.43□□□□□ -1.22
HERPUD1-208ENST00000563911 CENPFP49454 3210 aa7.42□□□□□ -1.22
HERPUD1-208ENST00000563911 C4BPAP04003 597 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-208ENST00000563911 LSP1P33241 339 aa7.42□□□□□ -1.22
HERPUD1-208ENST00000563911 SESN3P58005 492 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms