RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 CASRP41180 1078 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 BUD31P41223 144 aaPredicted RBP6.38□□□□□ -1.39
USP8-218ENST00000561330 FKBP15Q5T1M5 1219 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 MAMDC4Q6UXC1 1216 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 Q6ZSN1 163 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 SGMS1Q86VZ5 419 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 SSH1Q8WYL5 1049 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
USP8-218ENST00000561330 EDAQ92838 391 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 FAXDC2Q96IV6 333 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 EPC1Q9H2F5 836 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 GREM2Q9H772 168 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 MRFAP1Q9Y605 127 aa6.38□□□□□ -1.39
USP8-218ENST00000561330 MUSKO15146 869 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 GASTP01350 101 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 MALLQ13021 153 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 ACAP2Q15057 778 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
USP8-218ENST00000561330 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
USP8-218ENST00000561330 MFSD5Q6N075 450 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 RPUSD2Q8IZ73 545 aaKnown RBP6.37□□□□□ -1.39
USP8-218ENST00000561330 GPR156Q8NFN8 814 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 ZNF480Q8WV37 535 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
USP8-218ENST00000561330 ZNF512Q96ME7 567 aaPredicted RBP6.37□□□□□ -1.39
USP8-218ENST00000561330 SLC2A13Q96QE2 648 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 ADI1Q9BV57 179 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 ENKD1Q9H0I2 346 aa6.37□□□□□ -1.39
USP8-218ENST00000561330 RBM12Q9NTZ6 932 aaKnown RBP6.37□□□□□ -1.39
USP8-218ENST00000561330 KLHL33A6NCF5 533 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 ADSLP30566 484 aaPredicted RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 ELAVL1Q15717 326 aaKnown RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 PTPN21Q16825 1174 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 BRDTQ58F21 947 aaPredicted RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 PALM2Q8IXS6 379 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 ANKRD35Q8N283 1001 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 ZNF808Q8N4W9 903 aaPredicted RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 IL17RAQ96F46 866 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 CDC5LQ99459 802 aaKnown RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 GPR20Q99678 358 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 SMAD5Q99717 465 aaKnown RBP6.36□□□□□ -1.39
USP8-218ENST00000561330 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 SCOCQ9UIL1 159 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 TSC22D4Q9Y3Q8 395 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 PCDHGA2Q9Y5H1 932 aa6.36□□□□□ -1.39
USP8-218ENST00000561330 CAPN14A8MX76 684 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 CYP27B1O15528 508 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 HOXA3O43365 443 aaPredicted RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 XPOTO43592 962 aaKnown RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 GNAT2P19087 354 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 ECHS1P30084 290 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 MCAMP43121 646 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 GZMKP49863 264 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 MRPL49Q13405 166 aaKnown RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 MST1LQ2TV78 715 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 GSPT2Q8IYD1 628 aaKnown RBP6.35□□□□□ -1.39
USP8-218ENST00000561330 PPM1NQ8N819 430 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP8-218ENST00000561330 MIEF2Q96C03 454 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 BORCS6Q96GS4 357 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 DMRT3Q9NQL9 472 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 TESMINQ9Y4I5 508 aa6.35□□□□□ -1.39
USP8-218ENST00000561330 TNKSO95271 1327 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 MFAP3LO75121 409 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 ITGA10O75578 1167 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 STC2O76061 302 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 IPO13O94829 963 aaKnown RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 CCND1P24385 295 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 CRHR1P34998 444 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 EXOSC10Q01780 885 aaKnown RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 APBA1Q02410 837 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 PPP3CAQ08209 521 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 R3HDM1Q15032 1099 aaKnown RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 NOMO1Q15155 1222 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 PCBP2Q15366 365 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP8-218ENST00000561330 CDSNQ15517 529 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 FAM214AQ32MH5 1076 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 SPTY2D1Q68D10 685 aaPredicted RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 PDZD4Q76G19 769 aaPredicted RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 THEMISQ8N1K5 641 aaPredicted RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 JADE3Q92613 823 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 TYW1Q9NV66 732 aaKnown RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 HECAQ9UBI9 543 aaPredicted RBP6.34□□□□□ -1.39
USP8-218ENST00000561330 DNM3Q9UQ16 869 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 GIT1Q9Y2X7 761 aa6.34□□□□□ -1.39
USP8-218ENST00000561330 PCDHGA12O60330 932 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 PER3P56645 1201 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 KRT85P78386 507 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 APBB1IPQ7Z5R6 666 aaPredicted RBP6.33□□□□□ -1.4
USP8-218ENST00000561330 ELOA2Q8IYF1 753 aaPredicted RBP6.33□□□□□ -1.4
USP8-218ENST00000561330 LILRA3Q8N6C8 439 aaPredicted RBP6.33□□□□□ -1.4
USP8-218ENST00000561330 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 MDM1Q8TC05 714 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms