RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 BZW2Q9Y6E2 419 aaKnown RBP14.99□□□□□ -0.01
TPM1-215ENST00000558868 SSU72P8A0A1W2PR75 194 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 GOLGA8IPA6NC78 632 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 GOLGA8JA6NMD2 632 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 IGHA2P01877 340 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 SERPING1P05155 500 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 PRKCBP05771 671 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 ZNF286BP0CG31 522 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 SRGAP2CP0DJJ0 459 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 UCHL3P15374 230 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 CYP2C19P33261 490 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 MATR3P43243 847 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM1-215ENST00000558868 PSMC4P43686 418 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 PHKA2P46019 1235 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 IGBP1P78318 339 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 CDC42EP1Q00587 391 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 CYP24A1Q07973 514 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
TPM1-215ENST00000558868 MTF1Q14872 753 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 SPA17Q15506 151 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 ASIC2Q16515 512 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 TRIM65Q6PJ69 517 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 SAAL1Q96ER3 474 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 CAPNS2Q96L46 248 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 PRIMPOLQ96LW4 560 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 INTS2Q9H0H0 1204 aaKnown RBP14.98□□□□□ -0.01
TPM1-215ENST00000558868 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 DEF6Q9H4E7 631 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 NLRC4Q9NPP4 1024 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 AIPL1Q9NZN9 384 aa14.98□□□□□ -0.01
TPM1-215ENST00000558868 KPNA6O60684 536 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 TOM1L1O75674 476 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
TPM1-215ENST00000558868 CCDC172P0C7W6 258 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 AKR1A1P14550 325 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 ANXA13P27216 316 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 MXI1P50539 228 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
TPM1-215ENST00000558868 DRP2Q13474 957 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 GRIK4Q16099 956 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 CCL14Q16627 93 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 DPY19L2P1Q6NXN4 242 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 MTHFD1LQ6UB35 978 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 CBWD2Q8IUF1 395 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 KIF18AQ8NI77 898 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 PARD3BQ8TEW8 1205 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 TRAPPC12Q8WVT3 735 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 FAM213AQ9BRX8 229 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 DESI2Q9BSY9 194 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 MSTO1Q9BUK6 570 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 TARS2Q9BW92 718 aaKnown RBP14.97□□□□□ -0.01
TPM1-215ENST00000558868 TMEM8AQ9HCN3 771 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 LUC7LQ9NQ29 371 aaKnown RBP14.97□□□□□ -0.01
TPM1-215ENST00000558868 USP20Q9Y2K6 914 aa14.97□□□□□ -0.01
TPM1-215ENST00000558868 A0A0B4J269 797 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ACKR2O00590 384 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 CLDN3O15551 220 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 MGAMO43451 1857 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 MSCO60682 206 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 F2P00734 622 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ADRB2P07550 413 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ACTN1P12814 892 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 FERP16591 822 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 STAT1P42224 750 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 TERF1P54274 439 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 PTENP60484 403 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ETF1P62495 437 aaKnown RBP14.96□□□□□ -0.01
TPM1-215ENST00000558868 PSMD6Q15008 389 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 CBWD6Q4V339 395 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ARHGAP29Q52LW3 1261 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 CBWD3Q5JTY5 395 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 CBWD5Q5RIA9 395 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 PRPF38BQ5VTL8 546 aaKnown RBP14.96□□□□□ -0.01
TPM1-215ENST00000558868 KRT39Q6A163 491 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 ZNF662Q6ZS27 426 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
TPM1-215ENST00000558868 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 CFHR5Q9BXR6 569 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 STK33Q9BYT3 514 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 FZD8Q9H461 694 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 SIX2Q9NPC8 291 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 PRMT7Q9NVM4 692 aaPredicted RBP14.96□□□□□ -0.01
TPM1-215ENST00000558868 APEX2Q9UBZ4 518 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 AKT3Q9Y243 479 aa14.96□□□□□ -0.01
TPM1-215ENST00000558868 NRCAMQ92823 1304 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms