RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 PCDHA12Q9UN75 941 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 IGLV3-22A0A075B6J6 115 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 FAM86B1E9PN63 330 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 POLR2DO15514 142 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 MAFGO15525 162 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 SLC26A4O43511 780 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 MARCH6O60337 910 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 LGR5O75473 907 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 FAM86B2P0C5J1 330 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TXNP10599 105 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 UBA7P41226 1012 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TECP42680 631 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 ALDH5A1P51649 535 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 PSMC6P62333 389 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TTLL4Q14679 1199 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 CAMK4Q16566 473 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 PRR16Q569H4 304 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 NFRKBQ6P4R8 1299 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 KRBA2Q6ZNG9 492 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 USP49Q70CQ1 688 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 BTLAQ7Z6A9 289 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 IQUBQ8NA54 791 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 USP38Q8NB14 1042 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 ETNPPLQ8TBG4 499 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 LENG9Q96B70 501 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 SCLYQ96I15 445 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 FGD4Q96M96 766 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 IWS1Q96ST2 819 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 MXRA8Q9BRK3 442 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 PANK2Q9BZ23 570 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TNMDQ9H2S6 317 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 TTC12Q9H892 705 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 PXMP2Q9NR77 195 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 CXXC1Q9P0U4 656 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 LRWD1Q9UFC0 647 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 COG5Q9UP83 839 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 FRMPD4Q14CM0 1322 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 MCM3APO60318 1980 aa6.89□□□□□ -1.31
DEPDC4-209ENST00000550587 ASTN1O14525 1302 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 UMODL1Q5DID0 1318 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 MSH4O15457 936 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 STAM2O75886 525 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 BAIAP3O94812 1187 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 SLFN14P0C7P3 912 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 CYP2C9P11712 490 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 RABGGTBP53611 331 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 MRPS9P82933 396 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 PURAQ00577 322 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 SETQ01105 290 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 PGM5Q15124 567 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 ARHGEF16Q5VV41 709 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 LRSAM1Q6UWE0 723 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 SLC30A10Q6XR72 485 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 PLA2G4DQ86XP0 818 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 CYP2W1Q8TAV3 490 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 CAGE1Q8TC20 777 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 CCDC34Q96HJ3 373 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 PDCD2LQ9BRP1 358 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 CCDC39Q9UFE4 941 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 HOOK1Q9UJC3 728 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 UBIAD1Q9Y5Z9 338 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 MYO9BQ13459 2157 aa6.88□□□□□ -1.31
DEPDC4-209ENST00000550587 GRIN2DO15399 1336 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 A0A087X0B3 334 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 SYCE3A1L190 88 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 A6NJR5 290 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 IPO5O00410 1097 aaKnown RBP6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 LILRB5O75023 590 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 EFCAB14O75071 495 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 PSMD10O75832 226 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 CA3P07451 260 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 ITGB5P18084 799 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 CCND2P30279 289 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 CDC25AP30304 524 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 SPIRE1Q08AE8 756 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 ADGRE1Q14246 886 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 STXBP2Q15833 593 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 PTGISQ16647 500 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 RRAGBQ5VZM2 374 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 KRT79Q5XKE5 535 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 CABP7Q86V35 215 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 PDILTQ8N807 584 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 CNNM3Q8NE01 707 aa6.87□□□□□ -1.31
DEPDC4-209ENST00000550587 NUDT8Q8WV74 236 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms