RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 GOLGA6L22H0YM25 854 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 ACOT7O00154 380 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 GOLIM4O00461 696 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 DTNBO60941 627 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 MMEP08473 750 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 SLC6A11P48066 632 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 SLC16A1P53985 500 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 HERVK_113P62684 666 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 ANO4Q32M45 955 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 RNF220Q5VTB9 566 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 CLEC4GQ6UXB4 293 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 CILP2Q8IUL8 1156 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 PHOSPHO1Q8TCT1 267 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 POF1BQ8WVV4 589 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 GBP4Q96PP9 640 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 APOL5Q9BWW9 433 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 LRRC4CQ9HCJ2 640 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 MYOTQ9UBF9 498 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 ANAPC4Q9UJX5 808 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 MORC2Q9Y6X9 1032 aaPredicted RBP7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 MYOM1P52179 1685 aa7.48□□□□□ -1.21
TGFBR1-208ENST00000550253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 HTRA2O43464 458 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 HTR1BP28222 390 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 KIR2DL1P43626 348 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 KIR2DL2P43627 348 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 LGALS4P56470 323 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 MVKQ03426 396 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 MYBPC3Q14896 1274 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ANO6Q4KMQ2 910 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 TIGD7Q6NT04 549 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PTF1AQ7RTS3 328 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 NKAPQ8N5F7 415 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 NGDNQ8NEJ9 315 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 FERMT2Q96AC1 680 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 TUBGCP5Q96RT8 1024 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 RTEL1Q9NZ71 1219 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 COL18A1P39060 1754 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 RGPD5Q99666 1765 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 RASA4BC9J798 803 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 RASA4O43374 803 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 YY1P25490 414 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PEX2P28328 305 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PPM1FP49593 454 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 CACNB3P54284 484 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 RTP1P59025 263 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 NFIAQ12857 509 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 IFIT5Q13325 482 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 TTC38Q5R3I4 469 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 SWSAP1Q6NVH7 229 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 UNQ6494/PRO21346Q6UXR6 183 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PRR23CQ6ZRP0 262 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 KANSL1Q7Z3B3 1105 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ALYREFQ86V81 257 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 DEPTORQ8TB45 409 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ERCC4Q92889 916 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 CGRRF1Q99675 332 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 SELENOOQ9BVL4 669 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PDLIM7Q9NR12 457 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ZC3H7BQ9UGR2 993 aaKnown RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ASB1Q9Y576 335 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 POLR3AO14802 1390 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 COL5A2P05997 1499 aaPredicted RBP7.47□□□□□ -1.21
TGFBR1-208ENST00000550253 ACEP12821 1306 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 CCDC154A6NI56 674 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 PRLP01236 227 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 PFKMP08237 780 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 CDK17Q00537 523 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 TUBB8Q3ZCM7 444 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 KIAA1841Q6NSI8 718 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 TRIM48Q8IWZ4 208 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 MARCH10Q8NA82 808 aaPredicted RBP7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 RIN2Q8WYP3 895 aaPredicted RBP7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 PRSS50Q9UI38 385 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 LZTS1Q9Y250 596 aa7.46□□□□□ -1.22
TGFBR1-208ENST00000550253 AKAP12Q02952 1782 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 PIK3C2AO00443 1686 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 EIF3AQ14152 1382 aaKnown RBP7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 RAB3GAP2Q9H2M9 1393 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 CAPN8A6NHC0 703 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 USP2O75604 605 aaPredicted RBP7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 APOL3O95236 402 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 TACR1P25103 407 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 PIK3CBP42338 1070 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 WASP42768 502 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 BCAR1P56945 870 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 SNX17Q15036 470 aa7.45□□□□□ -1.22
TGFBR1-208ENST00000550253 CPSF6Q16630 551 aaKnown RBP eCLIP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms