RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 KLRC2P26717 231 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 TWF2Q6IBS0 349 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 GLB1LQ6UWU2 654 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 INO80BQ9C086 356 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 ZSWIM4Q9H7M6 989 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 TBC1D13Q9NVG8 400 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 IGSF9Q9P2J2 1179 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 INPP5FQ9Y2H2 1132 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 DMXL1Q9Y485 3027 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 NARSO43776 548 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 CFHP08603 1231 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SKIP12755 728 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 RFC5P40937 340 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 SLC11A1P49279 550 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 CLCN4P51793 760 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 EMC2Q15006 297 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 C15orf39Q6ZRI6 1047 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 CATSPER4Q7RTX7 472 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 DGLUCYQ7Z3D6 616 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 TPH2Q8IWU9 490 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 KLHL5Q96PQ7 755 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 MTMR9Q96QG7 549 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 HSD17B14Q9BPX1 270 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 EIF2AK1Q9BQI3 630 aaKnown RBP13.23□□□□□ -0.29
GABPB1-206ENST00000543881 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 GBP3Q9H0R5 595 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 XPNPEP1Q9NQW7 623 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 FAM105AQ9NUU6 356 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 WNT16Q9UBV4 365 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 PCDHA12Q9UN75 941 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 PPME1Q9Y570 386 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 R4GN57 208 aa13.23□□□□□ -0.29
GABPB1-206ENST00000543881 ZNF292O60281 2723 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 ARID2Q68CP9 1835 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 WDR87Q6ZQQ6 2873 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
GABPB1-206ENST00000543881 ZNF623O75123 536 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 OFD1O75665 1012 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
GABPB1-206ENST00000543881 CNPP09543 421 aaKnown RBP13.22□□□□□ -0.29
GABPB1-206ENST00000543881 RFX1P22670 979 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-206ENST00000543881 CALCRLQ16602 461 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 TMEM60Q9H2L4 133 aa13.22□□□□□ -0.29
GABPB1-206ENST00000543881 TTC12Q9H892 705 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-206ENST00000543881 A0A087WWV3 80 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 B4GALT3O60512 393 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 NEMFO60524 1076 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 LYPLA2O95372 231 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 TXKP42681 527 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.3
GABPB1-206ENST00000543881 GUCY1B3Q02153 619 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 UBXN11Q5T124 520 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 FERMT3Q86UX7 667 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 ZNF280BQ86YH2 543 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-206ENST00000543881 STK39Q9UEW8 545 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.3
GABPB1-206ENST00000543881 GAS2O43903 313 aaKnown RBP13.2□□□□□ -0.3
GABPB1-206ENST00000543881 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-206ENST00000543881 TRIM29Q14134 588 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
GABPB1-206ENST00000543881 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 TCP11Q8WWU5 503 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 KIF2CQ99661 725 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 MTRQ99707 1265 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 TBC1D17Q9HA65 648 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
GABPB1-206ENST00000543881 CA14Q9ULX7 337 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
GABPB1-206ENST00000543881 CCDC195A0A1B0GUA6 201 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 POTEMA6NI47 508 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 C2CD2LO14523 706 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 ASAP2O43150 1006 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms