RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CYP2B6P20813 491 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 CTGFP29279 349 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 FCGRTP55899 365 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 CCL14Q16627 93 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 C1orf220Q5T0J3 134 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 TRIM65Q6PJ69 517 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 ZPBP2Q6X784 338 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.79
GNE-206ENST00000543356 USP37Q86T82 979 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 CBWD2Q8IUF1 395 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 LRRC71Q8N4P6 559 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 RDH13Q8NBN7 331 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 ZSWIM2Q8NEG5 633 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 PLEKHO2Q8TD55 490 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 SAAL1Q96ER3 474 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 NFKBIZQ9BYH8 718 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 TUT1Q9H6E5 874 aaKnown RBP10.15□□□□□ -0.79
GNE-206ENST00000543356 NHEJ1Q9H9Q4 299 aaPredicted RBP10.15□□□□□ -0.79
GNE-206ENST00000543356 SUGCTQ9HAC7 445 aa10.15□□□□□ -0.79
GNE-206ENST00000543356 CASP8AP2Q9UKL3 1982 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 EIF3CLB5ME19 914 aaKnown RBP10.14□□□□□ -0.79
GNE-206ENST00000543356 RFX1P22670 979 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 DLG4P78352 724 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 POU5F1BQ06416 359 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 CYP24A1Q07973 514 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 PRAMEF19Q5SWL8 479 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 SFMBT2Q5VUG0 894 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 EFCAB12Q6NXP0 572 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 EIF3CQ99613 913 aaKnown RBP10.14□□□□□ -0.79
GNE-206ENST00000543356 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
GNE-206ENST00000543356 NLRC4Q9NPP4 1024 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 AIPL1Q9NZN9 384 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 USP20Q9Y2K6 914 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 SSU72P8A0A1W2PR75 194 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 GOLGA8IPA6NC78 632 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 GOLGA8JA6NMD2 632 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 MSCO60682 206 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 EDN1P05305 212 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 ACTN1P12814 892 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 GTF2H1P32780 548 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 CYP2C19P33261 490 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 JAM2P57087 298 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 APBA1Q02410 837 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 CETN1Q12798 172 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 ZNF662Q6ZS27 426 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 TLK2Q86UE8 772 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 ACRBPQ8NEB7 543 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 MRPL4Q9BYD3 311 aaKnown RBP10.14□□□□□ -0.79
GNE-206ENST00000543356 ARHGAP20Q9P2F6 1191 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 DOCK3Q8IZD9 2030 aa10.14□□□□□ -0.79
GNE-206ENST00000543356 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 LCA5LO95447 670 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 LDHAP00338 332 aaKnown RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 F2P00734 622 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 SERPING1P05155 500 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 CLCN3P51790 818 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 KRT83P78385 493 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 LACTBP83111 547 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 PPP3CAQ08209 521 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PPFIA1Q13136 1202 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 EPC2Q52LR7 807 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 HGSNATQ68CP4 663 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 MTHFD1LQ6UB35 978 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 RHPN2Q8IUC4 686 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 MYRIPQ8NFW9 859 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PARD3BQ8TEW8 1205 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PRIMPOLQ96LW4 560 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 AGO2Q9UKV8 859 aaKnown RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 REXO2Q9Y3B8 237 aaKnown RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 A0A0B4J269 797 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 ZNF233A6NK53 670 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 LRRIQ3A6PVS8 624 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 DYNC1LI2O43237 492 aaPredicted RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 PRKCBP05771 671 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 SRGAP2CP0DJJ0 459 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 KLRC1P26715 233 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 CPT1AP50416 773 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 MXI1P50539 228 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PTENP60484 403 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 IGBP1P78318 339 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PSMD6Q15008 389 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 GRIK4Q16099 956 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 ASIC2Q16515 512 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 MAPK6Q16659 721 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 SLC9C1Q4G0N8 1177 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 IQCEQ6IPM2 695 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 EHBP1Q8NDI1 1231 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 LMO3Q8TAP4 145 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 CCDC42Q96M95 316 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 TARS2Q9BW92 718 aaKnown RBP10.13□□□□□ -0.79
GNE-206ENST00000543356 CFHR5Q9BXR6 569 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 HAPLN2Q9GZV7 340 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 TMEM8AQ9HCN3 771 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms