RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RHOT1Q8IXI2 618 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 GLIS3Q8NEA6 775 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MCPH1Q8NEM0 835 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 FBXO25Q8TCJ0 367 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 RAPGEF5Q92565 580 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CALN1Q9BXU9 219 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC40A1Q9NP59 571 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CPSF2Q9P2I0 782 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 TACC3Q9Y6A5 838 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MAD1L1Q9Y6D9 718 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 ARHGAP42A6NI28 874 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 MSH4O15457 936 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 CDH16O75309 829 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 STK10O94804 968 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 BAG2O95816 211 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ITGA4P13612 1032 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 NPEPPSP55786 919 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ERVK-9P63128 1117 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 SARNPP82979 210 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 SKOR1P84550 965 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TFAMQ00059 246 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 RASA3Q14644 834 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 LONRF1Q17RB8 773 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM270Q6UE05 265 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TRPM8Q7Z2W7 1104 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 RBM41Q96IZ5 413 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF341Q9BYN7 854 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 KIAA1586Q9HCI6 787 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 AGPAT3Q9NRZ7 376 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 HSPBP1Q9NZL4 362 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 USP15Q9Y4E8 981 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PCDHGC5Q9Y5F6 944 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PLS3P13797 630 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 JAK3P52333 1124 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC8A3P57103 927 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF394Q53GI3 561 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 LRRC55Q6ZSA7 311 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ENOSF1Q7L5Y1 443 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 LDHDQ86WU2 507 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 RFX6Q8HWS3 928 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 BAP1Q92560 729 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 GRAMD1AQ96CP6 724 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 HAUS1Q96CS2 278 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 RUSC1Q9BVN2 902 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 MIS12Q9H081 205 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 GDF3Q9NR23 364 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 NXF1Q9UBU9 619 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 CHORDC1Q9UHD1 332 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TRAF3IP3Q9Y228 551 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ARL2BPQ9Y2Y0 163 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TLR3O15455 904 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PSAPP07602 524 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PSMC5P62195 406 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 PSMC6P62333 389 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM119Q4V9L6 283 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 HP1BP3Q5SSJ5 553 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 BARGINQ6ZT62 677 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ERICH1Q86X53 443 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.76□□□□□ -1.015e-30■□□□□ 9.1
PRKAB1-207ENST00000542698 TUBB6Q9BUF5 446 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ROPN1BQ9BZX4 212 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ECT2Q9H8V3 914 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 ROPN1Q9HAT0 212 aaPredicted RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 AS3MTQ9HBK9 375 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 HERC5Q9UII4 1024 aaKnown RBP8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 FEM1BQ9UK73 627 aa8.76□□□□□ -1.01
PRKAB1-207ENST00000542698 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 A0A0A6YYK5 440 aaPredicted RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 GTPBP10A4D1E9 387 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 MCF2LO15068 1137 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 KRT76Q01546 638 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 KCNMA1Q12791 1236 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 PRKG1Q13976 671 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 STAT4Q14765 748 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 KYNUQ16719 465 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 IZUMO3Q5VZ72 239 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATA21Q7Z572 469 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 PRPF38AQ8NAV1 312 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM35BQ8NCS4 154 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 C9orf72Q96LT7 481 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TTC25Q96NG3 672 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TNS2Q63HR2 1409 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 CAND2O75155 1236 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 LDHAP00338 332 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 MKRN3Q13064 507 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 MIS18BP1Q6P0N0 1132 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 MMTAG2Q9BU76 263 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM120BA0PK00 339 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TULP2O00295 520 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 TXNDC9O14530 226 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 ECE2O60344 883 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms