RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FSTL4Q6MZW2 842 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 ARMC6Q6NXE6 501 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 DLK2Q6UY11 383 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 SPATA31D4Q6ZUB0 917 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 DOK3Q7L591 496 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 NME9Q86XW9 330 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 XYLT1Q86Y38 959 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 ZBTB38Q8NAP3 1195 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 HNRNPLLQ8WVV9 542 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 ZBTB9Q96C00 473 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 MRRFQ96E11 262 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 MAGEB10Q96LZ2 347 aaPredicted RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 LSM14BQ9BX40 385 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 CPEB1Q9BZB8 566 aaKnown RBP1.42□□□□□ -2.18
COPB1-212ENST00000534771 ACSS2Q9NR19 701 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 CHST2Q9Y4C5 530 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 LRP12Q9Y561 859 aa1.42□□□□□ -2.18
COPB1-212ENST00000534771 NOTCH3Q9UM47 2321 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 MAST3O60307 1309 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 WDR91A4D1P6 747 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 CGB1A6NKQ9 187 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 KRT37O76014 449 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 ALDH1A2O94788 518 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 SPDEFO95238 335 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 CFBP00751 764 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 FOSP01100 380 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 CLEC2LP0C7M8 214 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 GAAP10253 952 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 RBP3P10745 1247 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 ZSCAN20P17040 1043 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 KCNA6P17658 529 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 MGAT1P26572 445 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 GZMKP49863 264 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 KIF11P52732 1056 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 CACNA2D1P54289 1103 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 RNASE9P60153 205 aaKnown RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 KRTAP10-8P60410 259 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 SIM1P81133 766 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 ARID5AQ03989 594 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 ADCY2Q08462 1091 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 RAB33AQ14088 237 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 PDCD4Q53EL6 469 aaKnown RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 FOXB2Q5VYV0 432 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 TIGD7Q6NT04 549 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 DRICH1Q6PGQ1 229 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 SPATC1Q76KD6 591 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 OTOP1Q7RTM1 612 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 GPRIN1Q7Z2K8 1008 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 SLC44A3Q8N4M1 653 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 SH2D3CQ8N5H7 860 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 IGSF22Q8N9C0 903 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 ASB10Q8WXI3 467 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 IL17RAQ96F46 866 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 HIST1H2AHQ96KK5 128 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 Q96MF0 132 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 HIST1H2AJQ99878 128 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 NOL10Q9BSC4 688 aaKnown RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 BOCQ9BWV1 1114 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 TEX101Q9BY14 249 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 ALOXE3Q9BYJ1 711 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 POGKQ9P215 609 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 SLC17A6Q9P2U8 582 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 MAP3K2Q9Y2U5 619 aa1.41□□□□□ -2.18
COPB1-212ENST00000534771 USP15Q9Y4E8 981 aaPredicted RBP1.41□□□□□ -2.18
COPB1-212ENST00000534771 A0A0A6YYJ9 748 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 TBKBP1A7MCY6 615 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 DVL2O14641 736 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 PDPK1O15530 556 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 ADCY3O60266 1144 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 OPHN1O60890 802 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 C1QL1O75973 258 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 CDKL5O76039 1030 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 APOL3O95236 402 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 FGRP09769 529 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 ERCC5P28715 1186 aaPredicted RBP1.4□□□□□ -2.19
COPB1-212ENST00000534771 APBA1Q02410 837 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 OCA2Q04671 838 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 DUSP2Q05923 314 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 CD69Q07108 199 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 ADCY1Q08828 1119 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 LONRF2Q1L5Z9 754 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 SPDYE7PQ495Y7 208 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 TMEM177Q53S58 311 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 TMCO4Q5TGY1 634 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 EFCAB12Q6NXP0 572 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 Q6ZNX1 250 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 TAS1R1Q7RTX1 841 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 KANSL1Q7Z3B3 1105 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 MCF2L2Q86YR7 1114 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 PHYKPLQ8IUZ5 450 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 SYT12Q8IV01 421 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 PPP1R14CQ8TAE6 165 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 EXOC2Q96KP1 924 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 ADAM2Q99965 735 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 SOX7Q9BT81 388 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 PITHD1Q9GZP4 211 aaPredicted RBP1.4□□□□□ -2.19
COPB1-212ENST00000534771 MTFR1LQ9H019 292 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 MTG2Q9H4K7 406 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 SLC52A2Q9HAB3 445 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 INTS7Q9NVH2 962 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms