RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 BIRC2Q13490 618 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 NFIL3Q16649 462 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CYB5D1Q6P9G0 228 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 ANO5Q75V66 913 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 MAB21L3Q8N8X9 362 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 C1orf131Q8NDD1 294 aaKnown RBP12.48□□□□□ -0.41
USP35-207ENST00000530546 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
USP35-207ENST00000530546 MOV10L1Q9BXT6 1211 aaKnown RBP12.48□□□□□ -0.41
USP35-207ENST00000530546 BATF3Q9NR55 127 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 HSPBP1Q9NZL4 362 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
USP35-207ENST00000530546 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP35-207ENST00000530546 FAM107AO95990 144 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SLC7A5Q01650 507 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 PTGISQ16647 500 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CEP57Q86XR8 500 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SPATA4Q8NEY3 305 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 TEX13BQ9BXU2 312 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 GRID2IPA4D2P6 1211 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 C19orf81C9J6K1 198 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 F8VZ95 297 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 ZNF862O60290 1169 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 RGS20O76081 388 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 LYPLA2O95372 231 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 FERP16591 822 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SFNP31947 248 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SOX5P35711 763 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 VAMP7P51809 220 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 PPP3CAQ08209 521 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CCDC121Q6ZUS5 278 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CCDC127Q96BQ5 260 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
USP35-207ENST00000530546 NLRP14Q86W24 1093 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 FUKQ8N0W3 1084 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 MYCBPAPQ8TBZ2 947 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 STK33Q9BYT3 514 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
USP35-207ENST00000530546 ANKRD33BA6NCL7 494 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
USP35-207ENST00000530546 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
USP35-207ENST00000530546 PRKCIP41743 596 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 PHLDB3Q6NSJ2 640 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 CCT8L2Q96SF2 557 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 UBE2TQ9NPD8 197 aaPredicted RBP12.47□□□□□ -0.41
USP35-207ENST00000530546 MYH11P35749 1972 aa12.47□□□□□ -0.41
USP35-207ENST00000530546 H2AFZP0C0S5 128 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 KCNA2P16389 499 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 PRLRP16471 622 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 ABCB4P21439 1286 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 NPTX2P47972 431 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 FSTL1Q12841 308 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
USP35-207ENST00000530546 H2AFVQ71UI9 128 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 LNX1Q8TBB1 728 aaPredicted RBP12.46□□□□□ -0.41
USP35-207ENST00000530546 PLEKHO2Q8TD55 490 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 BSNDQ8WZ55 320 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 GPRASP2Q96D09 838 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 RSRC1Q96IZ7 334 aaKnown RBP12.46□□□□□ -0.41
USP35-207ENST00000530546 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.41
USP35-207ENST00000530546 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 SPATS2LQ9NUQ6 558 aaKnown RBP12.46□□□□□ -0.41
USP35-207ENST00000530546 APEX2Q9UBZ4 518 aa12.46□□□□□ -0.41
USP35-207ENST00000530546 DENND3A2RUS2 1198 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 GTF2BQ00403 316 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 IFT88Q13099 833 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 TREML2Q5T2D2 321 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 ARHGEF19Q8IW93 802 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 P3H4Q92791 437 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 KMT5AQ9NQR1 393 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms