RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ASAP3Q8TDY4 903 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 AK8Q96MA6 479 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 POLR3FQ9H1D9 316 aaPredicted RBP21.14■□□□□ 0.97
PKP3-204ENST00000526971 BHMT2Q9H2M3 363 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 CFAP54Q96N23 3096 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 HOXA2O43364 376 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 PDGFBP01127 241 aaPredicted RBP21.13■□□□□ 0.97
PKP3-204ENST00000526971 GLRA2P23416 452 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 PHKA2P46019 1235 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 PTENP60484 403 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 POU5F1BQ06416 359 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 HYIQ5T013 277 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 MAEAQ7L5Y9 396 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 CATSPER4Q7RTX7 472 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 SLC39A11Q8N1S5 342 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 MINDY3Q9H8M7 445 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 NGRNQ9NPE2 291 aaKnown RBP21.13■□□□□ 0.97
PKP3-204ENST00000526971 GPRC5CQ9NQ84 441 aa21.13■□□□□ 0.97
PKP3-204ENST00000526971 PUF60Q9UHX1 559 aaKnown RBP21.13■□□□□ 0.97
PKP3-204ENST00000526971 E9PMD0 336 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 SRGAP2BP0DMP2 458 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 PPM1AP35813 382 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 LONP1P36776 959 aaKnown RBP21.12■□□□□ 0.97
PKP3-204ENST00000526971 CAPSQ13938 189 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 ZRSR1Q15695 479 aaKnown RBP21.12■□□□□ 0.97
PKP3-204ENST00000526971 IFNLR1Q8IU57 520 aaPredicted RBP21.12■□□□□ 0.97
PKP3-204ENST00000526971 ABI1Q8IZP0 508 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 KCTD17Q8N5Z5 321 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 HELQQ8TDG4 1101 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 PNMA5Q96PV4 448 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 FAM86C1Q9NVL1 165 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 DACT1Q9NYF0 836 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 SPG21Q9NZD8 308 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 HCFC2Q9Y5Z7 792 aa21.12■□□□□ 0.97
PKP3-204ENST00000526971 C2orf71A6NGG8 1288 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 SLC26A4O43511 780 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 GRIN1Q05586 938 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 TMC7Q7Z402 723 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 KCNK18Q7Z418 384 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 CABP7Q86V35 215 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 USP28Q96RU2 1077 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 NT5C3AQ9H0P0 336 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 POMKQ9H5K3 350 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
PKP3-204ENST00000526971 MYO15AQ9UKN7 3530 aa21.11■□□□□ 0.97
PKP3-204ENST00000526971 ZFHX2Q9C0A1 2572 aaPredicted RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 A0A0U1RQF3 1178 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 NT5C1B-RDH14C9J2C7 533 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 ZSCAN22P10073 491 aaPredicted RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 HOXB8P17481 243 aaPredicted RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 UBA7P41226 1012 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 CEBPZQ03701 1054 aaKnown RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.97
PKP3-204ENST00000526971 TMEM173Q86WV6 379 aaPredicted RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 MRPL43Q8N983 215 aaKnown RBP21.1■□□□□ 0.97
PKP3-204ENST00000526971 FEZF2Q8TBJ5 459 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 CDK5RAP3Q96JB5 506 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 TRAIPQ9BWF2 469 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 NFKBIZQ9BYH8 718 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 AGPAT5Q9NUQ2 364 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 C2orf16Q68DN1 1984 aa21.1■□□□□ 0.97
PKP3-204ENST00000526971 C2CD4DB7Z1M9 353 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 CLASP2O75122 1294 aaKnown RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 MARCKSP29966 332 aaPredicted RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 KRT17Q04695 432 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 SMC1AQ14683 1233 aaKnown RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 CASP10Q92851 521 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 PLIN2Q99541 437 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 SMOC2Q9H3U7 446 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 TSHZ2Q9NRE2 1034 aa21.09■□□□□ 0.97
PKP3-204ENST00000526971 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 SRPRBQ9Y5M8 271 aaKnown RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 MORC2Q9Y6X9 1032 aaPredicted RBP21.09■□□□□ 0.97
PKP3-204ENST00000526971 INO80B-WBP1J3KQ70 363 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 EOMESO95936 686 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 WEE2P0C1S8 567 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 AVPR2P30518 371 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 HOXA11P31270 313 aaPredicted RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 BCAR1P56945 870 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 MBTD1Q05BQ5 628 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 SLC39A14Q15043 492 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 FOXD4L5Q5VV16 416 aaPredicted RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 KREMEN2Q8NCW0 462 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 BCL7CQ8WUZ0 217 aaPredicted RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 FOXD4L4Q8WXT5 416 aaPredicted RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 AUTS2Q8WXX7 1259 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 BSNDQ8WZ55 320 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 KIFAP3Q92845 792 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 CALML4Q96GE6 196 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 ZNF396Q96N95 335 aaPredicted RBP21.08■□□□□ 0.97
PKP3-204ENST00000526971 PRRX2Q99811 253 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 CSRNP2Q9H175 543 aa21.08■□□□□ 0.97
PKP3-204ENST00000526971 LRRIQ4A6NIV6 560 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 MEIS3P2A8K0S8 358 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 ERLIN2O94905 339 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 NASPP49321 788 aaPredicted RBP21.07■□□□□ 0.96
PKP3-204ENST00000526971 RINT1Q6NUQ1 792 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms