RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 PPP3CAQ08209 521 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 LRRC41Q15345 812 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 UBE3CQ15386 1083 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 TBR1Q16650 682 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 RNF151Q2KHN1 245 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 MST1LQ2TV78 715 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 UAP1L1Q3KQV9 507 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 HSP90AB2PQ58FF8 381 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 CCDC181Q5TID7 509 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 ABHD15Q6UXT9 468 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 MAGEB6Q8N7X4 407 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 ANKRD53Q8N9V6 530 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 NRG4Q8WWG1 115 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 RABGGTAQ92696 567 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 HDAC10Q969S8 669 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 C8orf48Q96LL4 319 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 KCNC2Q96PR1 638 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 GEMIN8Q9NWZ8 242 aaKnown RBP3.05□□□□□ -1.92
RNF4-219ENST00000513450 GOLGA6AQ9NYA3 693 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 DNM3Q9UQ16 869 aa3.05□□□□□ -1.92
RNF4-219ENST00000513450 NCANO14594 1321 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 HTRA2O43464 458 aaPredicted RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 SLC26A4O43511 780 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 DTNBO60941 627 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 CNOT4O95628 575 aaKnown RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 HSPA6P17066 643 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 BMP7P18075 431 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 PDCP20941 246 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 ECHS1P30084 290 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 ADAM8P78325 824 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 DUSP2Q05923 314 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 MLC1Q15049 377 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 NOMO1Q15155 1222 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 MINDY4Q4G0A6 757 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 ZFYVE27Q5T4F4 411 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 SLFN13Q68D06 897 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 KRT40Q6A162 431 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 PPP4R3AQ6IN85 833 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 LILRA6Q6PI73 481 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 LCNL1Q6ZST4 164 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 MIGA2Q7L4E1 593 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 FRMD5Q7Z6J6 570 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 TPH2Q8IWU9 490 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 CMTM4Q8IZR5 234 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 PRR18Q8N4B5 295 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 MSL3Q8N5Y2 521 aaKnown RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 OR7D4Q8NG98 312 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 OR14K1Q8NGZ2 314 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNF4-219ENST00000513450 ZNF480Q8WV37 535 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 CFHR4Q92496 578 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 HOXB13Q92826 284 aaPredicted RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 TSR2Q969E8 191 aaKnown RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 CYFIP2Q96F07 1278 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 NEIL1Q96FI4 390 aaPredicted RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 CCDC136Q96JN2 1154 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 C7orf25Q9BPX7 421 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 NELFAQ9H3P2 528 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 MANSC1Q9H8J5 431 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 BCO1Q9HAY6 547 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 NMRK2Q9NPI5 230 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 DMRT3Q9NQL9 472 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 TLR9Q9NR96 1032 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 ING3Q9NXR8 418 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 GPRC5DQ9NZD1 345 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 INTUQ9ULD6 942 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 IPPQ9Y573 584 aa3.04□□□□□ -1.92
RNF4-219ENST00000513450 CFAP20Q9Y6A4 193 aaKnown RBP3.04□□□□□ -1.92
RNF4-219ENST00000513450 CCDC154A6NI56 674 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 MATN2O00339 956 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 KIF3BO15066 747 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 ERC2O15083 957 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 LAMTOR5O43504 91 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 SGTAO43765 313 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 OFD1O75665 1012 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 CR2P20023 1033 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 LPOP22079 712 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 EDNRBP24530 442 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 ADSLP30566 484 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 RPS19P39019 145 aaKnown RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 BUD31P41223 144 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 SEPT2Q15019 361 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 GFOD2Q3B7J2 385 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 ATAT1Q5SQI0 421 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 IFIT1BQ5T764 474 aaKnown RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 B3GNT9Q6UX72 402 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 Q6ZVL8 140 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 USP45Q70EL2 814 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 PDZD4Q76G19 769 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 EPM2AIP1Q7L775 607 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 WDR75Q8IWA0 830 aaKnown RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 LILRA3Q8N6C8 439 aaPredicted RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 SYT8Q8NBV8 401 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 SHCBP1Q8NEM2 672 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 FEZF2Q8TBJ5 459 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 CLIP3Q96DZ5 547 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 RPL10LQ96L21 214 aaKnown RBP3.03□□□□□ -1.92
RNF4-219ENST00000513450 LMF1Q96S06 567 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 GPHA2Q96T91 129 aa3.03□□□□□ -1.92
RNF4-219ENST00000513450 MAP3K14Q99558 947 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms