RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SATB1Q01826 763 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 MEF2AQ02078 507 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 TCIRG1Q13488 830 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 CTR9Q6PD62 1173 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 NECAB2Q7Z6G3 386 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 NBPF5PQ86XG9 351 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 OTUD6BQ8N6M0 293 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 SHCBP1Q8NEM2 672 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 OR14K1Q8NGZ2 314 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 NKD2Q969F2 451 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 AHCYL2Q96HN2 611 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 GPATCH3Q96I76 525 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 MPHOSPH9Q99550 1183 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 PUS7LQ9H0K6 701 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 CFDP1Q9UEE9 299 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 DNAI1Q9UI46 699 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 ZFR2Q9UPR6 939 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 RBM8AQ9Y5S9 174 aaKnown RBP5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 CEP170Q5SW79 1584 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 ATP10BO94823 1461 aa5.58□□□□□ -1.52
HMGB3P13-201ENST00000511263 GOLGA8AA7E2F4 631 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 VGLL3A8MV65 326 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 ALG1L2C9J202 215 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 GOLIM4O00461 696 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 MTSS1O43312 755 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 ZNF623O75123 536 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 RAD17O75943 681 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 PFKMP08237 780 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 VSIG10L2P0DP72 767 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 COMTP21964 271 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 ENPP1P22413 925 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 SELENOPP49908 381 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 MFSD5Q6N075 450 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 CCDC62Q6P9F0 684 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 LIMS2Q7Z4I7 341 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 STRA8Q7Z7C7 330 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 BCL6BQ8N143 479 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 CLRN3Q8NCR9 226 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 OR14A2Q96R54 314 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 C1QTNF3Q9BXJ4 246 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 ANO3Q9BYT9 981 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 ATP8A1Q9Y2Q0 1164 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 SLC30A1Q9Y6M5 507 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 CLASP1Q7Z460 1538 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 MIA2Q96PC5 1412 aa5.57□□□□□ -1.52
HMGB3P13-201ENST00000511263 SAMD9Q5K651 1589 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PRSS38A1L453 326 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PATE3B3GLJ2 98 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 CCER2I3L3R5 266 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ELL2O00472 640 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 EYA4O95677 639 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 KIR2DL3P43628 341 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ADCY7P51828 1080 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 NPEPPSP55786 919 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 WNT3AP56704 352 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ATP2C1P98194 919 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 MAP2K1Q02750 393 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 HGFACQ04756 655 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PPARAQ07869 468 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 LMOD3Q0VAK6 560 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 GRM7Q14831 915 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ZKSCAN8Q15776 578 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 CLEC14AQ86T13 490 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ANKRD35Q8N283 1001 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 SSH1Q8WYL5 1049 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 ARL8AQ96BM9 186 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 DPYSL5Q9BPU6 564 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 MENTQ9BUN1 341 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 CCDC94Q9BW85 323 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 SSBP3Q9BWW4 388 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 BRINP2Q9C0B6 783 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 SLC52A1Q9NWF4 448 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 SRRDQ9UH36 339 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PRSS50Q9UI38 385 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PPP2R3BQ9Y5P8 575 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 PLB1Q6P1J6 1458 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 CFAP65Q6ZU64 1925 aaKnown RBP5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 SHROOM2Q13796 1616 aa5.56□□□□□ -1.52
HMGB3P13-201ENST00000511263 EPRSP07814 1512 aaKnown RBP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 KDM5BQ9UGL1 1544 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 GPR42O15529 346 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 PHF2O75151 1096 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 ID4P47928 161 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 SLC5A3P53794 718 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 ANTXR2P58335 489 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 MRPS9P82933 396 aaKnown RBP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 HDAC1Q13547 482 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 RIN1Q13671 783 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 ANO4Q32M45 955 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 ZBTB41Q5SVQ8 909 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 TCTN3Q6NUS6 607 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 UNQ6494/PRO21346Q6UXR6 183 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms