RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ERMNQ8TAM6 284 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 SLC22A17Q8WUG5 538 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 AUTS2Q8WXX7 1259 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 PBXIP1Q96AQ6 731 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 POLR3CQ9BUI4 534 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 TRIM6Q9C030 488 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 TMEM60Q9H2L4 133 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 DAXXQ9UER7 740 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 ZMYM2Q9UBW7 1377 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 ARL5CA6NH57 179 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 POTEMA6NI47 508 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 NRP1O14786 923 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 B4GALT3O60512 393 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 SPATA31C1P0DKV0 1188 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 ARF4P18085 180 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 ATP2B1P20020 1258 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 AFF1P51825 1210 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 AMHR2Q16671 573 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 CATSPER3Q86XQ3 398 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 CCDC83Q8IWF9 413 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 CPB2Q96IY4 423 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 VN1R3Q9BXE9 311 aa22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 EIF2AQ9BY44 585 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 POLR3FQ9H1D9 316 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 SH2B1Q9NRF2 756 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 MRPL17Q9NRX2 175 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-220ENST00000505307 USO1O60763 962 aaKnown RBP22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 MUTP22033 750 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 TRAPPC10P48553 1259 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 RARS2Q5T160 578 aaKnown RBP22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 KIAA1841Q6NSI8 718 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 SLC27A1Q6PCB7 646 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 CABP7Q86V35 215 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 COLGALT2Q8IYK4 626 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 FBXO18Q8NFZ0 1043 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 PRIMPOLQ96LW4 560 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 GAD1Q99259 594 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 PRRX2Q99811 253 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 POMKQ9H5K3 350 aa22.14■■□□□ 1.13
UBE2D3-220ENST00000505307 TRIOO75962 3097 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 A0A1B0GUA9 196 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 LILRB3O75022 631 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 SOD2P04179 222 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 OR52Z1P0C646 297 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 EPCAMP16422 314 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 KLRC2P26717 231 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 RPA1P27694 616 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 MLH1P40692 756 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 GUCY1B3Q02153 619 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 DSC1Q08554 894 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 ZBTB33Q86T24 672 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 SUGP1Q8IWZ8 645 aaKnown RBP22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 FBXL18Q96ME1 805 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 KLHL5Q96PQ7 755 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 RNF39Q9H2S5 420 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 SFXN1Q9H9B4 322 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 PRMT7Q9NVM4 692 aaPredicted RBP22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 DPP7Q9UHL4 492 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 USTQ9Y2C2 406 aa22.13■■□□□ 1.13
UBE2D3-220ENST00000505307 ZNF318Q5VUA4 2279 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 LRRIQ4A6NIV6 560 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 URODP06132 367 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 OR1G1P47890 313 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 GNL2Q13823 731 aaKnown RBP22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 ELMSAN1Q6PJG2 1045 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 ZBTB8OSQ8IWT0 167 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 PLCD3Q8N3E9 789 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 FAM184AQ8NB25 1140 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 HERC2P3Q9BVR0 1158 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 COLEC11Q9BWP8 271 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 C2orf40Q9H1Z8 148 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 HES2Q9Y543 173 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 PIEZO1Q92508 2521 aa22.12■■□□□ 1.13
UBE2D3-220ENST00000505307 MED24O75448 989 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 CNPP09543 421 aaKnown RBP22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 SCNN1GP51170 649 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 CLCN4P51793 760 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 ZNF174Q15697 407 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 FAM187BQ17R55 369 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 HAUS3Q68CZ6 603 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 CDCA2Q69YH5 1023 aaPredicted RBP22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 NOSTRINQ8IVI9 506 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 GPR65Q8IYL9 337 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 UBALD2Q8IYN6 164 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 ZDHHC14Q8IZN3 488 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 FBXL6Q8N531 539 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 C12orf76Q8N812 135 aaPredicted RBP22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 RPS6KC1Q96S38 1066 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 MARCH5Q9NX47 278 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 NOL7Q9UMY1 257 aaKnown RBP22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 PRG3Q9Y2Y8 225 aaPredicted RBP22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 STK24Q9Y6E0 443 aa22.11■■□□□ 1.13
UBE2D3-220ENST00000505307 A0A087WWV3 80 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 C2CD4DB7Z1M9 353 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 C1RP00736 705 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms