RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 C6orf50Q9HD87 102 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 SPATA6Q9NWH7 488 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-236ENST00000498808 ZDHHC7Q9NXF8 308 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
HDAC6-236ENST00000498808 KANSL1LA0AUZ9 987 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 LAMTOR5O43504 91 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 TGM5O43548 720 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 HOXA11P31270 313 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-236ENST00000498808 OR1G1P47890 313 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
HDAC6-236ENST00000498808 SNW1Q13573 536 aaKnown RBP17.52■□□□□ 0.4
HDAC6-236ENST00000498808 LRCH2Q5VUJ6 765 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 PARM1Q6UWI2 310 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 SHDQ96IW2 340 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 B3GALT6Q96L58 329 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 MINDY3Q9H8M7 445 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 CHST7Q9NS84 486 aa17.52■□□□□ 0.4
HDAC6-236ENST00000498808 MTF2Q9Y483 593 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-236ENST00000498808 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 GAS2O43903 313 aaKnown RBP17.51■□□□□ 0.39
HDAC6-236ENST00000498808 PSMD10O75832 226 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 SDHBP21912 280 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 ADD1P35611 737 aaKnown RBP17.51■□□□□ 0.39
HDAC6-236ENST00000498808 DSC1Q08554 894 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 LILRA6Q6PI73 481 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 B3GNT9Q6UX72 402 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
HDAC6-236ENST00000498808 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 SMG8Q8ND04 991 aaKnown RBP17.51■□□□□ 0.39
HDAC6-236ENST00000498808 RDM1Q8NG50 284 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 PHKBQ93100 1093 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 BORCS6Q96GS4 357 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 BCO2Q9BYV7 579 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 SMG5Q9UPR3 1016 aaKnown RBP17.51■□□□□ 0.39
HDAC6-236ENST00000498808 PCDHGA2Q9Y5H1 932 aa17.51■□□□□ 0.39
HDAC6-236ENST00000498808 DCDC2BA2VCK2 349 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 C1RP00736 705 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 TGM1P22735 817 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 GNA11P29992 359 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 CSTF1Q05048 431 aaKnown RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 MLF2Q15773 248 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 ANO5Q75V66 913 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 GLYCTKQ8IVS8 523 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 MIOSQ9NXC5 875 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 CDV3Q9UKY7 258 aaKnown RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 COL4A3BPQ9Y5P4 624 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 TDRD15B5MCY1 1934 aaKnown RBP17.5■□□□□ 0.39
HDAC6-236ENST00000498808 CACNA1GO43497 2377 aa17.5■□□□□ 0.39
HDAC6-236ENST00000498808 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 PRR5-ARHGAP8B1AHC4 643 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 LILRB5O75023 590 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 ZMYND10O75800 440 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 FSHRP23945 695 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 RCAN1P53805 252 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 ARHGAP8P85298 464 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 LMNB2Q03252 620 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 UBXN2BQ14CS0 331 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 ST3GAL2Q16842 350 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 PLA2G4FQ68DD2 849 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 ATRIPQ8WXE1 791 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 NELL1Q92832 810 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 GAD1Q99259 594 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 OSBPL6Q9BZF3 934 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 GPR62Q9BZJ7 368 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
HDAC6-236ENST00000498808 ZFP37Q9Y6Q3 630 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-236ENST00000498808 CHD8Q9HCK8 2581 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 ARL5CA6NH57 179 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 ITGA4P13612 1032 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 RPL17P18621 184 aaKnown RBP17.48■□□□□ 0.39
HDAC6-236ENST00000498808 CD72P21854 359 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 MLH1P40692 756 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 SCNN1GP51170 649 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 NTHL1P78549 312 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 PRKCQQ04759 706 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 SLC44A4Q53GD3 710 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 FUT10Q6P4F1 479 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
HDAC6-236ENST00000498808 SRGAP1Q7Z6B7 1085 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 GRASPQ7Z6J2 395 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-236ENST00000498808 ZFP42Q96MM3 310 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 MBOAT7Q96N66 472 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 RTKNQ9BST9 563 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
HDAC6-236ENST00000498808 PARD6AQ9NPB6 346 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDAC6-236ENST00000498808 ZSCAN32Q9NX65 697 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 FNIP2Q9P278 1114 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 CDH7Q9ULB5 785 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 IPPQ9Y573 584 aa17.48■□□□□ 0.39
HDAC6-236ENST00000498808 ADRB1P08588 477 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms