RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PIK3CAP42336 1068 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 UGCGQ16739 394 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 RNF207Q6ZRF8 634 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 ATG4CQ96DT6 458 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 IQCDQ96DY2 449 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
GPC1-209ENST00000495100 STK33Q9BYT3 514 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 ANKRD63C9JTQ0 380 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 GAP43P17677 238 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 FECHP22830 423 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 QARSP47897 775 aaKnown RBP14.45□□□□□ -0.1
GPC1-209ENST00000495100 PMS2P54278 862 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 CORO7P57737 925 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 TFAMQ00059 246 aaKnown RBP14.45□□□□□ -0.1
GPC1-209ENST00000495100 ZNF844Q08AG5 666 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 TMED2Q15363 201 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 SNRNP35Q16560 246 aaKnown RBP14.45□□□□□ -0.1
GPC1-209ENST00000495100 QPCTQ16769 361 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 ZBTB45Q96K62 511 aaPredicted RBP14.45□□□□□ -0.1
GPC1-209ENST00000495100 AIPL1Q9NZN9 384 aa14.45□□□□□ -0.1
GPC1-209ENST00000495100 KAT6AQ92794 2004 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 EGFRP00533 1210 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 NSFP46459 744 aaKnown RBP14.44□□□□□ -0.1
GPC1-209ENST00000495100 SNRNP48Q6IEG0 339 aaKnown RBP14.44□□□□□ -0.1
GPC1-209ENST00000495100 NT5DC3Q86UY8 548 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 MYCBPAPQ8TBZ2 947 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 ZBTB10Q96DT7 871 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 COG5Q9UP83 839 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 CHD4Q14839 1912 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 DOT1LQ8TEK3 1739 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 RASGRF2O14827 1237 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 GPC5P78333 572 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 BSPRYQ5W0U4 402 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 EFCAB13Q8IY85 973 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 ANKRD35Q8N283 1001 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 ZWILCHQ9H900 591 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 PSD3Q9NYI0 1048 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 COL20A1Q9P218 1284 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 GMNCA6NCL1 334 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 SNHG28P0DPA3 235 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 ADRA2BP18089 450 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 PPP2R2AP63151 447 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 CDK17Q00537 523 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 PTGISQ16647 500 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 ASTE1Q2TB18 679 aaPredicted RBP14.44□□□□□ -0.1
GPC1-209ENST00000495100 ATP13A4Q4VNC1 1196 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 GIMAP7Q8NHV1 300 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 LENG9Q96B70 501 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 PSMD1Q99460 953 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 PCSK1NQ9UHG2 260 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 AGTPBP1Q9UPW5 1226 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 GLI3P10071 1580 aa14.44□□□□□ -0.1
GPC1-209ENST00000495100 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 CNGA1P29973 690 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 CDC25CP30307 473 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 CYFIP2Q96F07 1278 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 IFT74Q96LB3 600 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 YDJCA8MPS7 323 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 CREB1P16220 341 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 TTC16Q8NEE8 873 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 SAE1Q9UBE0 346 aaPredicted RBP14.43□□□□□ -0.1
GPC1-209ENST00000495100 TRPC6Q9Y210 931 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
GPC1-209ENST00000495100 NOP9Q86U38 636 aaKnown RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 DEPTORQ8TB45 409 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 RAPGEF5Q92565 580 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 ISCUQ9H1K1 167 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 ZNF408Q9H9D4 720 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 PCDHGC5Q9Y5F6 944 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 PCDHA2Q9Y5H9 948 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 OPLAHO14841 1288 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 ZBED4O75132 1171 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 HNRNPH3P31942 346 aaKnown RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 STX2P32856 288 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 AARSP49588 968 aaKnown RBP eCLIP14.42□□□□□ -0.1
GPC1-209ENST00000495100 CLK2P49760 499 aaKnown RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 STRN3Q13033 797 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 CDO1Q16878 200 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 WNK4Q96J92 1243 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 WRNIP1Q96S55 665 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 RPAP3Q9H6T3 665 aaPredicted RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 VCPKMTQ9H867 229 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 VAV3Q9UKW4 847 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 BCL9LQ86UU0 1499 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 ECEL1O95672 775 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 P4HBP07237 508 aaKnown RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 SCP2P22307 547 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 RRM1P23921 792 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 ANKMY2Q8IV38 441 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 KAT2BQ92831 832 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 SLC5A5Q92911 643 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 NLRP4Q96MN2 994 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
GPC1-209ENST00000495100 EPN3Q9H201 632 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 PICK1Q9NRD5 415 aa14.42□□□□□ -0.1
GPC1-209ENST00000495100 SYNJ2BP-COX16A0A087WUM0 186 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms