RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 ERMNQ8TAM6 284 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 GAD1Q99259 594 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 S1PR5Q9H228 398 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 LRWD1Q9UFC0 647 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 MUTYHQ9UIF7 546 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 CDH22Q9UJ99 828 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 NOL7Q9UMY1 257 aaKnown RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 USP20Q9Y2K6 914 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 IPPQ9Y573 584 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 DCXO43602 365 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 NPTXRO95502 500 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 LIG1P18858 919 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 SP100P23497 879 aaPredicted RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 RPA1P27694 616 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 CCT6AP40227 531 aaKnown RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 OR1G1P47890 313 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 POU5F1BQ06416 359 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 PTGDRQ13258 359 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 RABEP1Q15276 862 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 MCTP1Q6DN14 999 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 TMEM184AQ6ZMB5 413 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 TAS1R1Q7RTX1 841 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 DDX53Q86TM3 631 aaKnown RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 CNNM3Q8NE01 707 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 VN1R3Q9BXE9 311 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 TRIM6Q9C030 488 aaPredicted RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 ZBP1Q9H171 429 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 KLK14Q9P0G3 267 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 KANSL3Q9P2N6 904 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 DBR1Q9UK59 544 aaKnown RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 KIAA1024Q9UPX6 916 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 PRG3Q9Y2Y8 225 aaPredicted RBP10.64□□□□□ -0.71
MSH5-218ENST00000494646 WDFY4Q6ZS81 3184 aa10.64□□□□□ -0.71
MSH5-218ENST00000494646 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 ARL5CA6NH57 179 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 C2CD2LO14523 706 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 ST18O60284 1047 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
MSH5-218ENST00000494646 WEE2P0C1S8 567 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 SRGAP2BP0DMP2 458 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 CTSAP10619 480 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 EPCAMP16422 314 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
MSH5-218ENST00000494646 CDC25AP30304 524 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 MLH1P40692 756 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 SCNN1GP51170 649 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 BSNDQ8WZ55 320 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 RABGGTAQ92696 567 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 CASP10Q92851 521 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 TMX3Q96JJ7 454 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 PHF7Q9BWX1 381 aaPredicted RBP10.63□□□□□ -0.71
MSH5-218ENST00000494646 UBN1Q9NPG3 1134 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 MYH11P35749 1972 aa10.63□□□□□ -0.71
MSH5-218ENST00000494646 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 FSD2A1L4K1 749 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 PP2D1A8MPX8 630 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 LOC730098B7Z3J9 87 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 E9PMD0 336 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 F8W810 466 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 MYBP10242 640 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 CYP11B2P19099 503 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 KLRC2P26717 231 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 GJB2P29033 226 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 TRAPPC10P48553 1259 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
MSH5-218ENST00000494646 ORC2Q13416 577 aaPredicted RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 PDIA5Q14554 519 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 CBX2Q14781 532 aaPredicted RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 PCBP1Q15365 356 aaKnown RBP eCLIP10.62□□□□□ -0.712e-6■■■■■ 36.4
MSH5-218ENST00000494646 ZRSR1Q15695 479 aaKnown RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 IL17AQ16552 155 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 ZBTB8OSQ8IWT0 167 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 COLGALT2Q8IYK4 626 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 MCPH1Q8NEM0 835 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 FEZF2Q8TBJ5 459 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 SNX29Q8TEQ0 813 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 SUSD6Q92537 303 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 CCDC51Q96ER9 411 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 NFKBIZQ9BYH8 718 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 BHMT2Q9H2M3 363 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 NXF3Q9H4D5 531 aaKnown RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
MSH5-218ENST00000494646 PRMT7Q9NVM4 692 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms