RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 PANK2Q9BZ23 570 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 TRIM9Q9C026 710 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 PDZD7Q9H5P4 517 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 RNF19AQ9NV58 838 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 MTMR10Q9NXD2 777 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
CPSF7-212ENST00000489728 NLRC5Q86WI3 1866 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 K7ENM7 598 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
CPSF7-212ENST00000489728 LINC00271P0C7V0 271 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 FGFR1P11362 822 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 SYKP43405 635 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 GTF2BQ00403 316 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-212ENST00000489728 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 NT5DC1Q5TFE4 455 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 ATF7IP2Q5U623 682 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 TAS1R3Q7RTX0 852 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
CPSF7-212ENST00000489728 P2RX5Q93086 422 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
CPSF7-212ENST00000489728 CASD1Q96PB1 797 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 ACO2Q99798 780 aaKnown RBP12.17□□□□□ -0.46
CPSF7-212ENST00000489728 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 KANSL3Q9P2N6 904 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 GIT1Q9Y2X7 761 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 IPPQ9Y573 584 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
CPSF7-212ENST00000489728 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TBKBP1A7MCY6 615 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TOM1L1O75674 476 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 MCF2P10911 925 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 ITGA4P13612 1032 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 LAG3P18627 525 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-212ENST00000489728 PROZP22891 400 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 KYAT1Q16773 422 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 KANK3Q6NY19 840 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 STXBP4Q6ZWJ1 553 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 SFR1Q86XK3 245 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TMEM192Q8IY95 271 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 URGCPQ8TCY9 931 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-212ENST00000489728 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
CPSF7-212ENST00000489728 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 RSAD1Q9HA92 442 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 PANK4Q9NVE7 773 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TBX20Q9UMR3 447 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 MRPL42Q9Y6G3 142 aaKnown RBP12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TRANK1O15050 2925 aa12.16□□□□□ -0.46
CPSF7-212ENST00000489728 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-212ENST00000489728 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 OFD1O75665 1012 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 PPP1R37O75864 691 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 NPTXRO95502 500 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 EDN1P05305 212 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 IDEP14735 1019 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 LIG1P18858 919 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 PPM1AP35813 382 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 BMPR1AP36894 532 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 NDUFA8P51970 172 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 ASIC1P78348 528 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 GRIN2CQ14957 1233 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 ZNF568Q3ZCX4 644 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 Q7L0L9 218 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 ZNF720Q7Z2F6 126 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 GAS2L1Q99501 681 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 TARS2Q9BW92 718 aaKnown RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 STRA6Q9BX79 667 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 EXOC7Q9UPT5 735 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms