RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MTSS1LQ765P7 747 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 HDAC7Q8WUI4 952 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 ING5Q8WYH8 240 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 TMEM175Q9BSA9 504 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 PLEKHA4Q9H4M7 779 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 GABBR1Q9UBS5 961 aa17.21■□□□□ 0.35
U2AF1-211ENST00000486519 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
U2AF1-211ENST00000486519 EML5Q05BV3 1969 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 A0A087WZ62 844 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 AXIN1O15169 862 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 MAGEB2O15479 319 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 ZNF623O75123 536 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 NRLP54845 237 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
U2AF1-211ENST00000486519 HEATR6Q6AI08 1181 aaKnown RBP17.2■□□□□ 0.34
U2AF1-211ENST00000486519 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 NPAS3Q8IXF0 933 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 COLGALT2Q8IYK4 626 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 NELL2Q99435 816 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-211ENST00000486519 LSM14BQ9BX40 385 aaKnown RBP17.2■□□□□ 0.34
U2AF1-211ENST00000486519 GPR62Q9BZJ7 368 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 ARRDC1-AS1Q9H2J1 176 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 CHST12Q9NRB3 414 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
U2AF1-211ENST00000486519 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
U2AF1-211ENST00000486519 FAM86B1E9PN63 330 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 NCAM2O15394 837 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 CCL16O15467 120 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 FAM86B2P0C5J1 330 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 RXRAP19793 462 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 UGCGQ16739 394 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 SOWAHCQ53LP3 525 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-211ENST00000486519 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 RABGGTAQ92696 567 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 ADAM33Q9BZ11 813 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 ITPR1Q14643 2758 aa17.19■□□□□ 0.34
U2AF1-211ENST00000486519 ASH1LQ9NR48 2969 aaKnown RBP17.18■□□□□ 0.34
U2AF1-211ENST00000486519 LAMA5O15230 3695 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 CARNS1A5YM72 827 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 TMEM150BA6NC51 233 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 K7ESF4 209 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 OR1G1P47890 313 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 WDR44Q5JSH3 913 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 PRSS55Q6UWB4 352 aaPredicted RBP17.18■□□□□ 0.34
U2AF1-211ENST00000486519 KSR1Q8IVT5 923 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 URGCPQ8TCY9 931 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 ZCCHC14Q8WYQ9 949 aaKnown RBP17.18■□□□□ 0.34
U2AF1-211ENST00000486519 MBOAT7Q96N66 472 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 LMAN1LQ9HAT1 526 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 MIOSQ9NXC5 875 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 DPP7Q9UHL4 492 aa17.18■□□□□ 0.34
U2AF1-211ENST00000486519 FLNBO75369 2602 aaKnown RBP17.17■□□□□ 0.34
U2AF1-211ENST00000486519 VWA8A3KMH1 1905 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 IGLV3-22A0A075B6J6 115 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 TMOD1P28289 359 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 GRM2Q14416 872 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 UBXN11Q5T124 520 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 TANGO2Q6ICL3 276 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 TCEAL6Q6IPX3 200 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 TCEAL3Q969E4 200 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 FAM193BQ96PV7 902 aaPredicted RBP17.17■□□□□ 0.34
U2AF1-211ENST00000486519 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 GCOM2Q9BZD3 368 aaPredicted RBP17.17■□□□□ 0.34
U2AF1-211ENST00000486519 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 FBXW11Q9UKB1 542 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 POLIQ9UNA4 740 aa17.17■□□□□ 0.34
U2AF1-211ENST00000486519 CCR3P51677 355 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 HEATR3Q7Z4Q2 680 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
U2AF1-211ENST00000486519 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 C12orf50Q8NA57 414 aaPredicted RBP17.16■□□□□ 0.34
U2AF1-211ENST00000486519 RSPH1Q8WYR4 309 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 MCRS1Q96EZ8 462 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
U2AF1-211ENST00000486519 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
U2AF1-211ENST00000486519 IPO5O00410 1097 aaKnown RBP17.15■□□□□ 0.34
U2AF1-211ENST00000486519 ADAM12O43184 909 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 OATP04181 439 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 CYP21A2P08686 494 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 CHRNB1P11230 501 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 CXCL12P48061 93 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 NOVA1P51513 510 aaKnown RBP17.15■□□□□ 0.34
U2AF1-211ENST00000486519 DSC1Q08554 894 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 ZNF252P-AS1Q0IIN9 211 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 SLC5A9Q2M3M2 681 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 Q6ZS52 159 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms