RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 XRRA1Q6P2D8 792 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 SRLQ86TD4 932 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 MIB1Q86YT6 1006 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 KIAA0319LQ8IZA0 1049 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 TXNDC5Q8NBS9 432 aaKnown RBP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 RSAD2Q8WXG1 361 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 LCORQ96JN0 433 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 TUBGCP5Q96RT8 1024 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 FOXB1Q99853 325 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 MYL10Q9BUA6 226 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 MAF1Q9H063 256 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 GNL3LQ9NVN8 582 aaKnown RBP5.62□□□□□ -1.51
VPS13A-211ENST00000484581 DPP7Q9UHL4 492 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 TMPRSS11EQ9UL52 423 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 DMTF1Q9Y222 760 aa5.62□□□□□ -1.51
VPS13A-211ENST00000484581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ABHD14A-ACY1A0A1B0GW23 586 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 PFKMP08237 780 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 SETSIPP0DME0 302 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ZNF20P17024 532 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 TNFRSF1AP19438 455 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 TRAPPC10P48553 1259 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 CACNB3P54284 484 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ITGA1P56199 1179 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 LGALS4P56470 323 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 NKX3-2P78367 333 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ALDH6A1Q02252 535 aaKnown RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 POU5F1BQ06416 359 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 MYBPC3Q14896 1274 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 LLGL1Q15334 1064 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 PAN2Q504Q3 1202 aaKnown RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 PRAMEF18Q5VWM3 479 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 PRAMEF9Q5VWM5 478 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 DARS2Q6PI48 645 aaKnown RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 KANSL1Q7Z3B3 1105 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 SLC41A1Q8IVJ1 513 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 HIPK4Q8NE63 616 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 CLEC4DQ8WXI8 215 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ERCC4Q92889 916 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 SELENOOQ9BVL4 669 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 ACE2Q9BYF1 805 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-211ENST00000484581 B3GNT5Q9BYG0 378 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 BTBD7Q9P203 1132 aa5.61□□□□□ -1.51
VPS13A-211ENST00000484581 HMGB1P1B2RPK0 211 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 C1QTNF3-AMACRE9PGA6 284 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 SUV39H1O43463 412 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 PQBP1O60828 265 aaKnown RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 CYP1A1P04798 512 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 FAHP16930 419 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 STAT5AP42229 794 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 ECE1P42892 770 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 AGFG1P52594 562 aaKnown RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 BCAR1P56945 870 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 ROM1Q03395 351 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 ADCY2Q08462 1091 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 CHAF1AQ13111 956 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 STK3Q13188 491 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 IFIT5Q13325 482 aaKnown RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 TRIM25Q14258 630 aaKnown RBP5.6□□□□□ -1.51
VPS13A-211ENST00000484581 SURF1Q15526 300 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 KIAA0753Q2KHM9 967 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 SLFN12LQ6IEE8 588 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 C1orf228Q6PIY5 440 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 FAM126BQ8IXS8 530 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 PPM1NQ8N819 430 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 MYRIPQ8NFW9 859 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 HERPUD2Q9BSE4 406 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 C1QTNF3Q9BXJ4 246 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 PRDM12Q9H4Q4 367 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 L1RE1Q9UN81 338 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 CDY2AQ9Y6F7 541 aa5.6□□□□□ -1.51
VPS13A-211ENST00000484581 PRAMEF22A3QJZ6 481 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 GOLIM4O00461 696 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 TBX3O15119 743 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 MATN3O15232 486 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 HTRA2O43464 458 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-211ENST00000484581 APOL3O95236 402 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 FSHBP01225 129 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 WASP42768 502 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 SLC6A3Q01959 620 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 GRIN1Q05586 938 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 MALLQ13021 153 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 ANO6Q4KMQ2 910 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 NPNTQ6UXI9 565 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 LIMS2Q7Z4I7 341 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 LYSMD2Q8IV50 215 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 OR14C36Q8NHC7 312 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-211ENST00000484581 SGCZQ96LD1 299 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-211ENST00000484581 BHMT2Q9H2M3 363 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms