RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 BHMT2Q9H2M3 363 aa27.9■■■□□ 2.06
VEGFA-213ENST00000482630 EPHX3Q9H6B9 360 aa27.9■■■□□ 2.06
VEGFA-213ENST00000482630 DDX19AQ9NUU7 478 aaKnown RBP27.9■■■□□ 2.06
VEGFA-213ENST00000482630 B4GALT5O43286 388 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 DDHD2O94830 711 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 ALDH2P05091 517 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 PPP2R5AQ15172 486 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 FAM187BQ17R55 369 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 ZBP1Q9H171 429 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 GIT1Q9Y2X7 761 aa27.89■■■□□ 2.06
VEGFA-213ENST00000482630 NCOR1O75376 2440 aa27.89■■■□□ 2.05
VEGFA-213ENST00000482630 A0A1B0GUA9 196 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 C2orf71A6NGG8 1288 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 C19orf67A6NJJ6 358 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 INPPL1O15357 1258 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 CXCL14O95715 111 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 NAMPTP43490 491 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 AFF1P51825 1210 aaKnown RBP27.88■■■□□ 2.05
VEGFA-213ENST00000482630 RBM10P98175 930 aaKnown RBP27.88■■■□□ 2.05
VEGFA-213ENST00000482630 KCNC3Q14003 757 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 GIT2Q14161 759 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 TMEM87AQ8NBN3 555 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 DEPTORQ8TB45 409 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 KHSRPQ92945 711 aaKnown RBP eCLIP27.88■■■□□ 2.051e-9■■■□□ 15.1
VEGFA-213ENST00000482630 IFT74Q96LB3 600 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 APOL6Q9BWW8 343 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 RNF39Q9H2S5 420 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 FZD8Q9H461 694 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 DNM3Q9UQ16 869 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 FAN1Q9Y2M0 1017 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 HES2Q9Y543 173 aa27.88■■■□□ 2.05
VEGFA-213ENST00000482630 ARL5CA6NH57 179 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 PI4K2BG5E9Z4 385 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 B4GALT3O60512 393 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 NPTXRO95502 500 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 MLH1P40692 756 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 ATP2C1P98194 919 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-213ENST00000482630 MAPK6Q16659 721 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 LLGL2Q6P1M3 1020 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 BCL7CQ8WUZ0 217 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-213ENST00000482630 BSNDQ8WZ55 320 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 KIFAP3Q92845 792 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 GAD1Q99259 594 aa27.87■■■□□ 2.05
VEGFA-213ENST00000482630 NXF3Q9H4D5 531 aaKnown RBP27.87■■■□□ 2.05
VEGFA-213ENST00000482630 USP15Q9Y4E8 981 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-213ENST00000482630 BDP1A6H8Y1 2624 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-213ENST00000482630 CTSAP10619 480 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 IL17AQ16552 155 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 TMEM132AQ24JP5 1023 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 LARP1BQ659C4 914 aaKnown RBP27.86■■■□□ 2.05
VEGFA-213ENST00000482630 ANKRD54Q6NXT1 300 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 CDR2LQ86X02 465 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-213ENST00000482630 CASP10Q92851 521 aa27.86■■■□□ 2.05
VEGFA-213ENST00000482630 PP2D1A8MPX8 630 aa27.85■■■□□ 2.05
VEGFA-213ENST00000482630 NRP1O14786 923 aa27.85■■■□□ 2.05
VEGFA-213ENST00000482630 N4BP3O15049 544 aa27.85■■■□□ 2.05
VEGFA-213ENST00000482630 IRAK3Q9Y616 596 aa27.85■■■□□ 2.05
VEGFA-213ENST00000482630 ZMYM2Q9UBW7 1377 aa27.85■■■□□ 2.05
VEGFA-213ENST00000482630 CLASP2O75122 1294 aaKnown RBP27.84■■■□□ 2.05
VEGFA-213ENST00000482630 PRKCBP05771 671 aa27.84■■■□□ 2.05
VEGFA-213ENST00000482630 ALADP13716 330 aa27.84■■■□□ 2.05
VEGFA-213ENST00000482630 HOXB8P17481 243 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-213ENST00000482630 SCNN1GP51170 649 aa27.84■■■□□ 2.05
VEGFA-213ENST00000482630 PRPF4BQ13523 1007 aaKnown RBP27.84■■■□□ 2.05
VEGFA-213ENST00000482630 ZFP42Q96MM3 310 aa27.84■■■□□ 2.05
VEGFA-213ENST00000482630 HCFC2Q9Y5Z7 792 aa27.84■■■□□ 2.05
VEGFA-213ENST00000482630 E9PMD0 336 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 NR1I2O75469 434 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 AKAP5P24588 427 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 CDC25AP30304 524 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 OR1G1P47890 313 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 EFNA5P52803 228 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 COLGALT2Q8IYK4 626 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 AUTS2Q8WXX7 1259 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 ADPGKQ9BRR6 497 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 CCDC113Q9H0I3 377 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 DAXXQ9UER7 740 aaPredicted RBP27.83■■■□□ 2.05
VEGFA-213ENST00000482630 PARP2Q9UGN5 583 aa27.83■■■□□ 2.05
VEGFA-213ENST00000482630 ACKR2O00590 384 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 LIG1P18858 919 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 DSC1Q08554 894 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 TPRNQ4KMQ1 711 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 TMEM31Q5JXX7 168 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 ARL6IP4Q66PJ3 421 aaKnown RBP27.82■■■□□ 2.04
VEGFA-213ENST00000482630 SUSD6Q92537 303 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 RPS6KC1Q96S38 1066 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 MMTAG2Q9BU76 263 aaKnown RBP27.82■■■□□ 2.04
VEGFA-213ENST00000482630 VN1R3Q9BXE9 311 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 PDZD7Q9H5P4 517 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 MIOSQ9NXC5 875 aa27.82■■■□□ 2.04
VEGFA-213ENST00000482630 PRG3Q9Y2Y8 225 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-213ENST00000482630 DCXO43602 365 aa27.81■■■□□ 2.04
VEGFA-213ENST00000482630 SYCE2Q6PIF2 218 aa27.81■■■□□ 2.04
VEGFA-213ENST00000482630 KCTD17Q8N5Z5 321 aa27.81■■■□□ 2.04
VEGFA-213ENST00000482630 PHF7Q9BWX1 381 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-213ENST00000482630 S1PR5Q9H228 398 aa27.81■■■□□ 2.04
VEGFA-213ENST00000482630 POLD4Q9HCU8 107 aa27.81■■■□□ 2.04
VEGFA-213ENST00000482630 VWA3AA6NCI4 1184 aa27.8■■■□□ 2.04
VEGFA-213ENST00000482630 GPR37L1O60883 481 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms