RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 HACE1Q8IYU2 909 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 ABI1Q8IZP0 508 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 FIBCD1Q8N539 461 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 RNF169Q8NCN4 708 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 CCDC34Q96HJ3 373 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM117Q9H0C3 514 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 PDZD7Q9H5P4 517 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF576Q9H609 170 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 UBN1Q9NPG3 1134 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 TNFSF13BQ9Y275 285 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 COL4A6Q14031 1691 aa11.9□□□□□ -0.5
ATG4B-219ENST00000479941 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TBKBP1A7MCY6 615 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 ZNF202O95125 648 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 EDN1P05305 212 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 FGFR1P11362 822 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 ITGA4P13612 1032 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 NMT1P30419 496 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 AFMP43652 599 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 ASIC1P78348 528 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TAP1Q03518 808 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 KANK3Q6NY19 840 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 CDR2LQ86X02 465 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 SFR1Q86XK3 245 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 HVCN1Q96D96 273 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 ACO2Q99798 780 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TARS2Q9BW92 718 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TTYH1Q9H313 450 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 RWDD3Q9Y3V2 267 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 IPPQ9Y573 584 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 GBF1Q92538 1859 aa11.89□□□□□ -0.51
ATG4B-219ENST00000479941 TOM1L1O75674 476 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 NPTXRO95502 500 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 ERVK-21P61565 698 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 FAM160A1Q05DH4 1040 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 COASYQ13057 564 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 CUL4BQ13620 913 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 ALCAMQ13740 583 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 GLB1LQ6UWU2 654 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 MAP4K3Q8IVH8 894 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-219ENST00000479941 DEFB123Q8N688 67 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 ENGASEQ8NFI3 743 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 HELQQ8TDG4 1101 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
ATG4B-219ENST00000479941 LPPQ93052 612 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 TCHPQ9BT92 498 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 STRA6Q9BX79 667 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 MRPL9Q9BYD2 267 aaKnown RBP11.88□□□□□ -0.51
ATG4B-219ENST00000479941 BLZF1Q9H2G9 400 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 PTPRHQ9HD43 1115 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 RNF19AQ9NV58 838 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 USP20Q9Y2K6 914 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
ATG4B-219ENST00000479941 MEIS3P2A8K0S8 358 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 OFD1O75665 1012 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 PPP1R37O75864 691 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 GCNT3O95395 438 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 PIGRP01833 764 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 MCF2P10911 925 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 PROZP22891 400 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 CASP1P29466 404 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 GATMP50440 423 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 ZNF568Q3ZCX4 644 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 PAN2Q504Q3 1202 aaKnown RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 ZC2HC1CQ53FD0 456 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 MPZL3Q6UWV2 235 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 STXBP4Q6ZWJ1 553 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 Q7L0L9 218 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 GRAMD1CQ8IYS0 662 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms