RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 UFL1O94874 794 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 EPHB1P54762 984 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 RFX6Q8HWS3 928 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 DISC1Q9NRI5 854 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 NKX1-2Q9UD57 310 aaPredicted RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 GRID2IPA4D2P6 1211 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 MAPK13O15264 365 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 CUL1Q13616 776 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 FAM102BQ5T8I3 360 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 RNF220Q5VTB9 566 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 HDDC2Q7Z4H3 204 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 SYT2Q8N9I0 419 aaPredicted RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PLEKHG4BQ96PX9 1271 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 LRRC37BQ96QE4 947 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 CYTH2Q99418 400 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 ADAM7Q9H2U9 754 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 TMEM59LQ9UK28 342 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 SMCO2A6NFE2 343 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 ABLIM1O14639 778 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 GNAZP19086 355 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PMLP29590 882 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 DYNC1I2Q13409 638 aaKnown RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 KIF22Q14807 665 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 SGSM1Q2NKQ1 1148 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 CCDC92Q53HC0 331 aaPredicted RBP12.24□□□□□ -0.45
U2AF1-209ENST00000475639 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 ANKRD27Q96NW4 1050 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 TRIM33Q9UPN9 1127 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PCDHGA4Q9Y5G9 962 aa12.24□□□□□ -0.45
U2AF1-209ENST00000475639 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ECEL1O95672 775 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 GFPT1Q06210 699 aaPredicted RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 MTA1Q13330 715 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 HOMEZQ8IX15 550 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 DHX38Q92620 1227 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 NCLNQ969V3 563 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 MRPL40Q9NQ50 206 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PGRMC1O00264 195 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 RASGRF2O14827 1237 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 HMGB3O15347 200 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PALMO75781 387 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ADCY1Q08828 1119 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ASPSCR1Q9BZE9 553 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ZNF212Q9UDV6 495 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ARHGAP26Q9UNA1 814 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SUGT1Q9Y2Z0 365 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 K7ENM7 598 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 EIF3BP55884 814 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TMED2Q15363 201 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TMC3Q7Z5M5 1100 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PHC3Q8NDX5 983 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 NEK9Q8TD19 979 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 FAM163AQ96GL9 167 aaPredicted RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PBKQ96KB5 322 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 FAM96AQ9H5X1 160 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TRIM45Q9H8W5 580 aaPredicted RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SLC8A2Q9UPR5 921 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 EXOC1LA0A1B0GW35 172 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TESPA1A2RU30 521 aaPredicted RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 F8VZ95 297 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 LGR5O75473 907 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SCNN1BP51168 640 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 MFAP3P55082 362 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 COPS2P61201 443 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 TFAP4Q01664 338 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 DHX9Q08211 1270 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 BNIP1Q12981 228 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ASRGL1Q7L266 308 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 RRM2BQ7LG56 351 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 FAM81BQ96LP2 452 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 STK17AQ9UEE5 414 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 FNDC3AQ9Y2H6 1198 aaKnown RBP12.23□□□□□ -0.45
U2AF1-209ENST00000475639 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
U2AF1-209ENST00000475639 SP100P23497 879 aaPredicted RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 BASP1P80723 227 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 MORF4L2Q15014 288 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 ZC3H18Q86VM9 953 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 HIPK4Q8NE63 616 aa12.22□□□□□ -0.45
U2AF1-209ENST00000475639 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
U2AF1-209ENST00000475639 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms