RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 HAUS3Q68CZ6 603 aa10□□□□□ -0.81
USF1-204ENST00000472217 CDCA2Q69YH5 1023 aaPredicted RBP10□□□□□ -0.81
USF1-204ENST00000472217 ANKRD54Q6NXT1 300 aa10□□□□□ -0.81
USF1-204ENST00000472217 PADI6Q6TGC4 694 aa10□□□□□ -0.81
USF1-204ENST00000472217 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
USF1-204ENST00000472217 CDR2LQ86X02 465 aaPredicted RBP10□□□□□ -0.81
USF1-204ENST00000472217 IGSF22Q8N9C0 903 aa10□□□□□ -0.81
USF1-204ENST00000472217 BSNDQ8WZ55 320 aa10□□□□□ -0.81
USF1-204ENST00000472217 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
USF1-204ENST00000472217 NXF3Q9H4D5 531 aaKnown RBP10□□□□□ -0.81
USF1-204ENST00000472217 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
USF1-204ENST00000472217 KANSL3Q9P2N6 904 aa10□□□□□ -0.81
USF1-204ENST00000472217 HCFC2Q9Y5Z7 792 aa10□□□□□ -0.81
USF1-204ENST00000472217 ARL5CA6NH57 179 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 PP2D1A8MPX8 630 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 NRP1O14786 923 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 INPPL1O15357 1258 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 DCXO43602 365 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 CLASP2O75122 1294 aaKnown RBP9.99□□□□□ -0.81
USF1-204ENST00000472217 NPTXRO95502 500 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 CXCL14O95715 111 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 CTSAP10619 480 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 ALADP13716 330 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 CYP11B2P19099 503 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 GJB2P29033 226 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 SCNN1GP51170 649 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 PDIA5Q14554 519 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 SLC27A1Q6PCB7 646 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 SYCE2Q6PIF2 218 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 SNX29Q8TEQ0 813 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 SUSD6Q92537 303 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 FAM193BQ96PV7 902 aaPredicted RBP9.99□□□□□ -0.81
USF1-204ENST00000472217 GAD1Q99259 594 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 TMEM175Q9BSA9 504 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 APOL6Q9BWW8 343 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 TRIM6Q9C030 488 aaPredicted RBP9.99□□□□□ -0.81
USF1-204ENST00000472217 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 FZD8Q9H461 694 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
USF1-204ENST00000472217 IRAK3Q9Y616 596 aa9.99□□□□□ -0.81
USF1-204ENST00000472217 TDRD15B5MCY1 1934 aaKnown RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 A0A1B0GUA9 196 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 TTLL13PA6NNM8 815 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 LOC730098B7Z3J9 87 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 LAD1O00515 517 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 ALDH2P05091 517 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 EDN1P05305 212 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 HOXB8P17481 243 aaPredicted RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 AKAP5P24588 427 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 PRPHP41219 470 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 NAMPTP43490 491 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 DSC1Q08554 894 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 CBX2Q14781 532 aaPredicted RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 PTPN14Q15678 1187 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 IL17AQ16552 155 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 FAM187BQ17R55 369 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 COLGALT2Q8IYK4 626 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 HACE1Q8IYU2 909 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 CASP10Q92851 521 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 PRIMPOLQ96LW4 560 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 PHF7Q9BWX1 381 aaPredicted RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 RAB34Q9BZG1 259 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 CCDC113Q9H0I3 377 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 C2orf40Q9H1Z8 148 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 DDX19AQ9NUU7 478 aaKnown RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 PRMT7Q9NVM4 692 aaPredicted RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 MARCH5Q9NX47 278 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 MIOSQ9NXC5 875 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 MUTYHQ9UIF7 546 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 CDH22Q9UJ99 828 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 KIAA1024Q9UPX6 916 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 FAN1Q9Y2M0 1017 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
USF1-204ENST00000472217 PRG3Q9Y2Y8 225 aaPredicted RBP9.98□□□□□ -0.81
USF1-204ENST00000472217 PRR33A8MZF0 331 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 E9PMD0 336 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 F8W810 466 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 H3BQV1 296 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
USF1-204ENST00000472217 PRKCBP05771 671 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 EPCAMP16422 314 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 CDC25AP30304 524 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 OR1G1P47890 313 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 MCM2P49736 904 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 PRPF4BQ13523 1007 aaKnown RBP9.97□□□□□ -0.81
USF1-204ENST00000472217 GIT2Q14161 759 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 PPP2R5AQ15172 486 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 MAPK6Q16659 721 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 TPRNQ4KMQ1 711 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 RILPL1Q5EBL4 403 aa9.97□□□□□ -0.81
USF1-204ENST00000472217 HERC4Q5GLZ8 1057 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms