RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 C2orf71A6NGG8 1288 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 H3BQV1 296 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 NAMPTP43490 491 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 ATP2C1P98194 919 aaPredicted RBP23.19■■□□□ 1.3
SREBF1-210ENST00000471445 DDX53Q86TM3 631 aaKnown RBP23.19■■□□□ 1.3
SREBF1-210ENST00000471445 C1QTNF1Q9BXJ1 281 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 C2orf40Q9H1Z8 148 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 RNF39Q9H2S5 420 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 FZD8Q9H461 694 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 NXF3Q9H4D5 531 aaKnown RBP23.19■■□□□ 1.3
SREBF1-210ENST00000471445 DDX19AQ9NUU7 478 aaKnown RBP23.19■■□□□ 1.3
SREBF1-210ENST00000471445 KIAA1024Q9UPX6 916 aa23.19■■□□□ 1.3
SREBF1-210ENST00000471445 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.19■■□□□ 1.3
SREBF1-210ENST00000471445 A0A1B0GUA9 196 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 PP2D1A8MPX8 630 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 POMCP01189 267 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 SRGAP2BP0DMP2 458 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 MLH1P40692 756 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 SLC27A1Q6PCB7 646 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 VPS52Q8N1B4 723 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 MRPL43Q8N983 215 aaKnown RBP23.18■■□□□ 1.3
SREBF1-210ENST00000471445 GAD1Q99259 594 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 VN1R3Q9BXE9 311 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 TRIM6Q9C030 488 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-210ENST00000471445 CCDC113Q9H0I3 377 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 IRAK3Q9Y616 596 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 MYH11P35749 1972 aa23.18■■□□□ 1.3
SREBF1-210ENST00000471445 BDP1A6H8Y1 2624 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 PI4K2BG5E9Z4 385 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 NPTXRO95502 500 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 CTSAP10619 480 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 COL9A1P20849 921 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 PPP2R5AQ15172 486 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 KRT79Q5XKE5 535 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 DTHD1Q6ZMT9 781 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 CDR2LQ86X02 465 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-210ENST00000471445 HACE1Q8IYU2 909 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 FAM193BQ96PV7 902 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-210ENST00000471445 POP1Q99575 1024 aaKnown RBP23.17■■□□□ 1.3
SREBF1-210ENST00000471445 MMTAG2Q9BU76 263 aaKnown RBP23.17■■□□□ 1.3
SREBF1-210ENST00000471445 GIT1Q9Y2X7 761 aa23.17■■□□□ 1.3
SREBF1-210ENST00000471445 USP15Q9Y4E8 981 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-210ENST00000471445 ARL5CA6NH57 179 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 DSC1Q08554 894 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 BMS1Q14692 1282 aaKnown RBP23.16■■□□□ 1.3
SREBF1-210ENST00000471445 ANKRD54Q6NXT1 300 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 COLGALT2Q8IYK4 626 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 ZFP42Q96MM3 310 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 APOL6Q9BWW8 343 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 HCFC2Q9Y5Z7 792 aa23.16■■□□□ 1.3
SREBF1-210ENST00000471445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.15■■□□□ 1.3
SREBF1-210ENST00000471445 TTLL13PA6NNM8 815 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 E9PMD0 336 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 CLASP2O75122 1294 aaKnown RBP23.15■■□□□ 1.3
SREBF1-210ENST00000471445 EDN1P05305 212 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 PRKCBP05771 671 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 SCNN1GP51170 649 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 CUL4AQ13619 759 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 GIT2Q14161 759 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 MAPK6Q16659 721 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 DEPTORQ8TB45 409 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 SUSD6Q92537 303 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 KIFAP3Q92845 792 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 CASP10Q92851 521 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 MARCH5Q9NX47 278 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 STK39Q9UEW8 545 aa23.15■■□□□ 1.3
SREBF1-210ENST00000471445 NRP1O14786 923 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 CDC25AP30304 524 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 LLGL2Q6P1M3 1020 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 SYCE2Q6PIF2 218 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 GSTCDQ8NEC7 633 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 AUTS2Q8WXX7 1259 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 KIFC3Q9BVG8 833 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 S1PR5Q9H228 398 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 PDZD7Q9H5P4 517 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 C11orf16Q9NQ32 467 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 MIOSQ9NXC5 875 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 FAN1Q9Y2M0 1017 aa23.14■■□□□ 1.29
SREBF1-210ENST00000471445 ACKR2O00590 384 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 N4BP3O15049 544 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 CXCL14O95715 111 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 ALDH2P05091 517 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 AKAP5P24588 427 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 CA8P35219 290 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 PRPF4BQ13523 1007 aaKnown RBP23.13■■□□□ 1.29
SREBF1-210ENST00000471445 PTPN14Q15678 1187 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 HYIQ5T013 277 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 LARP1BQ659C4 914 aaKnown RBP23.13■■□□□ 1.29
SREBF1-210ENST00000471445 ARL6IP4Q66PJ3 421 aaKnown RBP23.13■■□□□ 1.29
SREBF1-210ENST00000471445 KCNK18Q7Z418 384 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 RNF168Q8IYW5 571 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-210ENST00000471445 IFT74Q96LB3 600 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 DNM3Q9UQ16 869 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 DENND4AQ7Z401 1863 aa23.13■■□□□ 1.29
SREBF1-210ENST00000471445 TRIP11Q15643 1979 aa23.12■■□□□ 1.29
SREBF1-210ENST00000471445 HOXB8P17481 243 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-210ENST00000471445 PLXNA3P51805 1871 aa23.12■■□□□ 1.29
SREBF1-210ENST00000471445 GRIK3Q13003 919 aa23.12■■□□□ 1.29
SREBF1-210ENST00000471445 DAW1Q8N136 415 aa23.12■■□□□ 1.29
SREBF1-210ENST00000471445 RUSC1Q9BVN2 902 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms