RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MRPS27Q92552 414 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 LPPQ93052 612 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 IPO9Q96P70 1041 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 CASD1Q96PB1 797 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 MRPL4Q9BYD3 311 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 TMEM117Q9H0C3 514 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 PDZD7Q9H5P4 517 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 RNF19AQ9NV58 838 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 USP25Q9UHP3 1055 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 IPPQ9Y573 584 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 COL4A6Q14031 1691 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 MEIS3P2A8K0S8 358 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 K7ENM7 598 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 NPTXRO95502 500 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SLFN14P0C7P3 912 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 ITGA4P13612 1032 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 GAP43P17677 238 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 NDUFA8P51970 172 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 HERC4Q5GLZ8 1057 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 CLLU1OSQ5K130 101 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 AGMOQ6ZNB7 445 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SPRED2Q7Z698 418 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SLC17A8Q8NDX2 589 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 HELQQ8TDG4 1101 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 KCNN1Q92952 543 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 CLP1Q92989 425 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SAMD11Q96NU1 681 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 FIZ1Q96SL8 496 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 ACO2Q99798 780 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 C7orf25Q9BPX7 421 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 ADPGKQ9BRR6 497 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 C17orf80Q9BSJ5 609 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 TRIM9Q9C026 710 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 UBN1Q9NPG3 1134 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 PANK4Q9NVE7 773 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 MTUS1Q9ULD2 1270 aa15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 MRPL42Q9Y6G3 142 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-205ENST00000464493 FRMD3A2A2Y4 597 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 ACTN4O43707 911 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 OFD1O75665 1012 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 ABCD1P33897 745 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 AFMP43652 599 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 CSPP1Q1MSJ5 1256 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 GLB1LQ6UWU2 654 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 ZNF720Q7Z2F6 126 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 SFR1Q86XK3 245 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 CCDC65Q8IXS2 484 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 TMEM192Q8IY95 271 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 HACE1Q8IYU2 909 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 RSPH1Q8WYR4 309 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 GUCD1Q96NT3 240 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 CDX2Q99626 313 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 PRDM12Q9H4Q4 367 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 TYW1Q9NV66 732 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 TBX20Q9UMR3 447 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 TNFSF13BQ9Y275 285 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 RWDD3Q9Y3V2 267 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 HES2Q9Y543 173 aa15.94■□□□□ 0.14
SQSTM1-205ENST00000464493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 LINC00271P0C7V0 271 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 BMPR1AP36894 532 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 ASIC1P78348 528 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 GTF2BQ00403 316 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 DCAF4L1Q3SXM0 396 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 EPC2Q52LR7 807 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 SPOUT1Q5T280 376 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 EEF1DP3Q658K8 133 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 APBB1IPQ7Z5R6 666 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 PAGE5Q96GU1 130 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 TCHPQ9BT92 498 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 GOLPH3LQ9H4A5 285 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 ST6GALNAC4Q9H4F1 302 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 MRPL44Q9H9J2 332 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 RSAD1Q9HA92 442 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 PTPRHQ9HD43 1115 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 TBC1D7Q9P0N9 293 aa15.93■□□□□ 0.14
SQSTM1-205ENST00000464493 TRANK1O15050 2925 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 EPOPA6NHQ4 379 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 RFXAPO00287 272 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 RB1P06400 928 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 ZC2HC1CQ53FD0 456 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 NOMO2Q5JPE7 1267 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 ZPBP2Q6X784 338 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 LRRC55Q6ZSA7 311 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 GRAMD1CQ8IYS0 662 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 LRRC43Q8N309 656 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 FBXO22Q8NEZ5 403 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 BICD1Q96G01 975 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 APOL6Q9BWW8 343 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 MRPL9Q9BYD2 267 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 BLZF1Q9H2G9 400 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 CWH43Q9H720 699 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms