RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
RFX3-210ENST00000457373 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
RFX3-210ENST00000457373 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
RFX3-210ENST00000457373 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
RFX3-210ENST00000457373 LPPQ93052 612 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
RFX3-210ENST00000457373 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 FZD8Q9H461 694 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
RFX3-210ENST00000457373 NPTXRO95502 500 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 EOMESO95936 686 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 SKIP12755 728 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 PLS3P13797 630 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 IGFBP4P22692 258 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 RAB27AP51159 221 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 SMTNP53814 917 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 ERVK-21P61565 698 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
RFX3-210ENST00000457373 NOTUMQ6P988 496 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 METTL3Q86U44 580 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 CMTR2Q8IYT2 770 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 MYCT1Q8N699 235 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 HELQQ8TDG4 1101 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 STAMQ92783 540 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 DHX58Q96C10 678 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 PRIMPOLQ96LW4 560 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 C17orf75Q9HAS0 396 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 RC3H2Q9HBD1 1191 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 RNF19AQ9NV58 838 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
RFX3-210ENST00000457373 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
RFX3-210ENST00000457373 RALGAPA2Q2PPJ7 1873 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 EPOPA6NHQ4 379 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 MYMKA6NI61 221 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 ACKR2O00590 384 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 HOXA2O43364 376 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 ZNF623O75123 536 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 EDN1P05305 212 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 ITGA4P13612 1032 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 EFNA5P52803 228 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 FAM187BQ17R55 369 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 TRIM6Q9C030 488 aaPredicted RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 TMEM134Q9H6X4 195 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 TYW1Q9NV66 732 aaKnown RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 KCNG1Q9UIX4 513 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 HES2Q9Y543 173 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
RFX3-210ENST00000457373 COL4A6Q14031 1691 aa11.1□□□□□ -0.63
RFX3-210ENST00000457373 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 A0A1B0GUA9 196 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 N4BP3O15049 544 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 POLR2DO15514 142 aaKnown RBP11.09□□□□□ -0.63
RFX3-210ENST00000457373 TBCAO75347 108 aaKnown RBP11.09□□□□□ -0.63
RFX3-210ENST00000457373 IDEP14735 1019 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 FOSL2P15408 326 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 CTNNB1P35222 781 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 GPM6BQ13491 265 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 CLLU1OSQ5K130 101 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 ADALQ6DHV7 355 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 AGMOQ6ZNB7 445 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 MRPL10Q7Z7H8 261 aaKnown RBP11.09□□□□□ -0.63
RFX3-210ENST00000457373 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 SMG8Q8ND04 991 aaKnown RBP11.09□□□□□ -0.63
RFX3-210ENST00000457373 CNNM3Q8NE01 707 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 GDPD5Q8WTR4 605 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 CCDC51Q96ER9 411 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
RFX3-210ENST00000457373 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 ARHGAP28Q9P2N2 729 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms