RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 EIF3JO75822 258 aaKnown RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 MPIG6BO95866 241 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 CELA3BP08861 270 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 KPNA1P52294 538 aaPredicted RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 ERVK-21P61565 698 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 OS9Q13438 667 aaPredicted RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 GFOD2Q3B7J2 385 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 TBC1D10BQ4KMP7 808 aaPredicted RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 ERICH6BQ5W0A0 696 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 DPP8Q6V1X1 898 aaPredicted RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 CHST14Q8NCH0 376 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 CLRN3Q8NCR9 226 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 AHCYL2Q96HN2 611 aaKnown RBP5.52□□□□□ -1.53
LINC00393-202ENST00000452852 GBP4Q96PP9 640 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 CAMKK2Q96RR4 588 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 MENTQ9BUN1 341 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 BOCQ9BWV1 1114 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 ADAM29Q9UKF5 820 aa5.52□□□□□ -1.53
LINC00393-202ENST00000452852 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 GOLGA6CA6NDK9 693 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 GOLGA6BA6NDN3 693 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 SNUPNO95149 360 aaKnown RBP5.51□□□□□ -1.53
LINC00393-202ENST00000452852 LDHAP00338 332 aaKnown RBP5.51□□□□□ -1.53
LINC00393-202ENST00000452852 GOLGA6DP0CG33 693 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 SDHAP31040 664 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 IL13RA1P78552 427 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 KLF1Q13351 362 aaPredicted RBP5.51□□□□□ -1.53
LINC00393-202ENST00000452852 HDAC1Q13547 482 aaPredicted RBP5.51□□□□□ -1.53
LINC00393-202ENST00000452852 INAVAQ3KP66 663 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 CATSPEREQ5SY80 951 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 PGM2L1Q6PCE3 622 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 LRSAM1Q6UWE0 723 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 C11orf74Q86VG3 221 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 CMIPQ8IY22 773 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 HIPK4Q8NE63 616 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 TIFAQ96CG3 184 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 AJUBAQ96IF1 538 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 OXSMQ9NWU1 459 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 GOLGA6AQ9NYA3 693 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 ZBTB21Q9ULJ3 1066 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 PIK3R4Q99570 1358 aa5.51□□□□□ -1.53
LINC00393-202ENST00000452852 SHPRHQ149N8 1683 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 NCOA3Q9Y6Q9 1424 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 COL16A1Q07092 1604 aaPredicted RBP5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.5□□□□□ -1.53
LINC00393-202ENST00000452852 FZD9O00144 591 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 DVL2O14641 736 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 B4GALT4O60513 344 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ULK1O75385 1050 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 PLATP00750 562 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ITGB3P05106 788 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 PF4V1P10720 104 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 CSF2RBP32927 897 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ECE1P42892 770 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ODF1Q14990 250 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 WDR72Q3MJ13 1102 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
LINC00393-202ENST00000452852 GPR155Q7Z3F1 870 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 PLEKHH3Q7Z736 793 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 DGKHQ86XP1 1220 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ERCC4Q92889 916 aaPredicted RBP5.5□□□□□ -1.53
LINC00393-202ENST00000452852 SLC5A5Q92911 643 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 FAXDC2Q96IV6 333 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 RBM15Q96T37 977 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC00393-202ENST00000452852 BTBD2Q9BX70 525 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 KATNBL1Q9H079 304 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ASB1Q9Y576 335 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 COMMD10Q9Y6G5 202 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 SETBP1Q9Y6X0 1596 aa5.5□□□□□ -1.53
LINC00393-202ENST00000452852 ZNF536O15090 1300 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 CLTCL1P53675 1640 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 XRN1Q8IZH2 1706 aaKnown RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 GOLGA6L22H0YM25 854 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 K7ESF4 209 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 SUV39H1O43463 412 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 LAMTOR5O43504 91 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 TGM5O43548 720 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 POLD1P28340 1107 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 ADCY8P40145 1251 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 KIF11P52732 1056 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 PPP2CBP62714 309 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 PPP2CAP67775 309 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 CD83Q01151 205 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 OCRLQ01968 901 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 HLTFQ14527 1009 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 BRD3Q15059 726 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 STILQ15468 1287 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 SURF1Q15526 300 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 MEX3CQ5U5Q3 659 aaKnown RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 BROXQ5VW32 411 aa5.49□□□□□ -1.53
LINC00393-202ENST00000452852 CXorf57Q6NSI4 855 aaKnown RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 TMED8Q6PL24 325 aaPredicted RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 RALYLQ86SE5 291 aaKnown RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
LINC00393-202ENST00000452852 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms