RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 IPPQ9Y573 584 aa6.47□□□□□ -1.37
HMGB1P26-201ENST00000452520 SLC4A7Q9Y6M7 1214 aa6.47□□□□□ -1.37
HMGB1P26-201ENST00000452520 CREB3O43889 395 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 PRAMEF4O60810 478 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 PHF2O75151 1096 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 TOX4O94842 621 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 KRT18P05783 430 aaKnown RBP6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 U2AF1L5P0DN76 240 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 PDCP20941 246 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 BPIFB4P59827 614 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 U2AF1Q01081 240 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 MGAT2Q10469 447 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 UAP1L1Q3KQV9 507 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 SIAH1Q8IUQ4 282 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 MAGEB6Q8N7X4 407 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 ARNT2Q9HBZ2 717 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 JADE2Q9NQC1 790 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 USP40Q9NVE5 1235 aa6.46□□□□□ -1.38
HMGB1P26-201ENST00000452520 CCDC154A6NI56 674 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 HTRA2O43464 458 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 JUNP05412 331 aaKnown RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 VSIG10L2P0DP72 767 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 BMP7P18075 431 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 LPOP22079 712 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 PPP2CBP62714 309 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 PPP2CAP67775 309 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 SEPT2Q15019 361 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 MLC1Q15049 377 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 ZNF568Q3ZCX4 644 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 GAGE13Q4V321 117 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 SYCP2LQ5T4T6 812 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 Q6ZVL8 140 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 EPM2AIP1Q7L775 607 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 PRR18Q8N4B5 295 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 ANKRD53Q8N9V6 530 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 OR2I1PQ8NGU4 316 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 TTC8Q8TAM2 541 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 CFHR4Q92496 578 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 HOXB13Q92826 284 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 RPL10LQ96L21 214 aaKnown RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 AIFM3Q96NN9 605 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 MPHOSPH6Q99547 160 aaKnown RBP6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 TLR9Q9NR96 1032 aa6.45□□□□□ -1.38
HMGB1P26-201ENST00000452520 GOLGA6CA6NDK9 693 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 MATN2O00339 956 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 MTSS1O43312 755 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 SASH1O94885 1247 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 CNOT4O95628 575 aaKnown RBP6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 MYL1P05976 194 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GOLGA6DP0CG33 693 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 WNT3AP56704 352 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 RAC3P60763 192 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 ADAM8P78325 824 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 MINDY4Q4G0A6 757 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GJC2Q5T442 439 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 ARHGEF18Q6ZSZ5 1173 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 TSHZ1Q6ZSZ6 1077 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 PLEKHH3Q7Z736 793 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 RABGGTAQ92696 567 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 HDAC10Q969S8 669 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 CLIP3Q96DZ5 547 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC39A13Q96H72 371 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 LRGUKQ96M69 825 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 KCNC2Q96PR1 638 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GTPBP4Q9BZE4 634 aaKnown RBP6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 PRDM16Q9HAZ2 1276 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 CHST12Q9NRB3 414 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 GOLGA6AQ9NYA3 693 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 PUF60Q9UHX1 559 aaKnown RBP6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 COMMD10Q9Y6G5 202 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
HMGB1P26-201ENST00000452520 PMS2P1A4D2B8 440 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 AP1G1O43747 822 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 GASTP01350 101 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 MST1LQ2TV78 715 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 C3orf36Q3SXR2 165 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 ATAT1Q5SQI0 421 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 IFIT1BQ5T764 474 aaKnown RBP6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 KRT40Q6A162 431 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 PPP4R4Q6NUP7 873 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 USP45Q70EL2 814 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 CATIPQ7Z7H3 387 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 ZDHHC14Q8IZN3 488 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 LILRA3Q8N6C8 439 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 FEZF2Q8TBJ5 459 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 NEIL1Q96FI4 390 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 ANLNQ9NQW6 1124 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 PCDHA13Q9Y5I0 950 aa6.43□□□□□ -1.38
HMGB1P26-201ENST00000452520 FAM171A2A8MVW0 826 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC26A4O43511 780 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 OFD1O75665 1012 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms