RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KCNA6P17658 529 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 BDNFP23560 247 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PPP2R1AP30153 589 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 HOXD12P35452 270 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CCT6AP40227 531 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ASPAP45381 313 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CSE1LP55060 971 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SH3BGRP55822 239 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 MRPS35P82673 323 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 U2AF1Q01081 240 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CYP4F3Q08477 520 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PPIDQ08752 370 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ITKQ08881 620 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CBX3Q13185 183 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 GRB10Q13322 594 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 LRP8Q14114 963 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 EIF4A2Q14240 407 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZNF268Q14587 947 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ARHGEF6Q15052 776 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 E2F5Q15329 346 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 INF2Q27J81 1249 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CFAP100Q494V2 611 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACCSLQ4AC99 568 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 NOL9Q5SY16 702 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SLC35F1Q5T1Q4 408 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZFYVE27Q5T4F4 411 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 FAAH2Q6GMR7 532 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 GALNT17Q6IS24 598 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 OLFML1Q6UWY5 402 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 DYMQ7RTS9 669 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 UBE3BQ7Z3V4 1068 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMC6Q7Z403 805 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZNF804AQ7Z570 1209 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SRGAP1Q7Z6B7 1085 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 LUZP1Q86V48 1076 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ERICH1Q86X53 443 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CCDC65Q8IXS2 484 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SMYD4Q8IYR2 804 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CHPFQ8IZ52 775 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SYT2Q8N9I0 419 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMEM145Q8NBT3 493 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SMC1BQ8NDV3 1235 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 NSMCE1Q8WV22 266 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TEKT4Q8WW24 435 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 MAIP1Q8WWC4 291 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 MTMR8Q96EF0 704 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 MEGF10Q96KG7 1140 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 MAGEB10Q96LZ2 347 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 HAPLN3Q96S86 360 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TTC1Q99614 292 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SENP7Q9BQF6 1050 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CDH19Q9H159 772 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 IFT22Q9H7X7 185 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PIDD1Q9HB75 910 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SSU72Q9NP77 194 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 FAM105AQ9NUU6 356 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 DDX19AQ9NUU7 478 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TBCCD1Q9NVR7 557 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 GALNT8Q9NY28 637 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PRR13Q9NZ81 148 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 HOOK1Q9UJC3 728 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PCOLCE2Q9UKZ9 415 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TPCN1Q9ULQ1 816 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 HPCAL4Q9UM19 191 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 DDX19BQ9UMR2 479 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 SSX2IPQ9Y2D8 614 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 DAAM1Q9Y4D1 1078 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PCDHB2Q9Y5E7 798 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PCDHB12Q9Y5F1 795 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACTL7BQ9Y614 415 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CDK12Q9NYV4 1490 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CEP170BQ9Y4F5 1589 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 KDM5AP29375 1690 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 N4BP2Q86UW6 1770 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 KAT6BQ8WYB5 2073 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ABCC5O15440 1437 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ASXL2Q76L83 1435 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PREX2Q70Z35 1606 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ADCY10Q96PN6 1610 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 KIAA1210Q9ULL0 1709 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CDC42BPBQ9Y5S2 1711 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CUL7Q14999 1698 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ADCY9O60503 1353 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 NUP155O75694 1391 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 GOLGA6L7A0A1B0GV03 622 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 E2F8A0AVK6 867 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 VWA3AA6NCI4 1184 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMEM247A6NEH6 219 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 FAM25EA8MYX2 175 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 B4E1Z4 1266 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 BOLA2-SMG1P6H3BVE0 249 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 STXBP3O00186 592 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 GABRDO14764 452 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SART1O43290 800 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 KDM1AO60341 852 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SLITRK5O94991 958 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ALX3O95076 343 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CRTAMO95727 393 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TSPY4P0CV99 314 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms