RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SSBP05455 408 aaKnown RBP eCLIP23.35■■□□□ 1.33
VSX1-206ENST00000444511 SPATA31C1P0DKV0 1188 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 MLH1P40692 756 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 MTHFRP42898 656 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 AMHR2Q16671 573 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 MAEAQ7L5Y9 396 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 BMP8AQ7Z5Y6 402 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 PPFIBP1Q86W92 1011 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 CATSPER3Q86XQ3 398 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 C12orf76Q8N812 135 aaPredicted RBP23.35■■□□□ 1.33
VSX1-206ENST00000444511 PBXIP1Q96AQ6 731 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 GAD1Q99259 594 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 APOL6Q9BWW8 343 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 EMILIN2Q9BXX0 1053 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 KCNH6Q9H252 994 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 RNF39Q9H2S5 420 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 POMKQ9H5K3 350 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 HES2Q9Y543 173 aa23.35■■□□□ 1.33
VSX1-206ENST00000444511 ARL5CA6NH57 179 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 ARF4P18085 180 aaPredicted RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 HOXD11P31277 338 aaPredicted RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 OR1G1P47890 313 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 ORC2Q13416 577 aaPredicted RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 GNL2Q13823 731 aaKnown RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 PTPN21Q16825 1174 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 CABP7Q86V35 215 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 MCPH1Q8NEM0 835 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 ERMNQ8TAM6 284 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 SLC22A17Q8WUG5 538 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 NACC1Q96RE7 527 aa23.34■■□□□ 1.33
VSX1-206ENST00000444511 FOXP1Q9H334 677 aaPredicted RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 PRG3Q9Y2Y8 225 aaPredicted RBP23.34■■□□□ 1.33
VSX1-206ENST00000444511 LRRIQ4A6NIV6 560 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 SPDYE4A6NLX3 237 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 INPPL1O15357 1258 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 B4GALT5O43286 388 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 MED24O75448 989 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 WEE2P0C1S8 567 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 OR52Z1P0C646 297 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 KLRC2P26717 231 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 HMGN5P82970 282 aaKnown RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 SIGLEC14Q08ET2 396 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 ZNF174Q15697 407 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 ATAT1Q5SQI0 421 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 FAM184AQ8NB25 1140 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 POLR3CQ9BUI4 534 aaPredicted RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 NXF3Q9H4D5 531 aaKnown RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 GPRC5CQ9NQ84 441 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 MRPL17Q9NRX2 175 aaKnown RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 DBR1Q9UK59 544 aaKnown RBP23.33■■□□□ 1.33
VSX1-206ENST00000444511 GIT1Q9Y2X7 761 aa23.33■■□□□ 1.33
VSX1-206ENST00000444511 NR1I2O75469 434 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 URODP06132 367 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 RBM25P49756 843 aaKnown RBP23.32■■□□□ 1.32
VSX1-206ENST00000444511 SCNN1GP51170 649 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 KIAA1841Q6NSI8 718 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 SLC27A1Q6PCB7 646 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 SUGP1Q8IWZ8 645 aaKnown RBP23.32■■□□□ 1.32
VSX1-206ENST00000444511 COLGALT2Q8IYK4 626 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 FBXL18Q96ME1 805 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 ZFP42Q96MM3 310 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 KLHL5Q96PQ7 755 aa23.32■■□□□ 1.32
VSX1-206ENST00000444511 C2CD2LO14523 706 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 NPTXRO95502 500 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 SOD2P04179 222 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 CNPP09543 421 aaKnown RBP23.31■■□□□ 1.32
VSX1-206ENST00000444511 TTC38Q5R3I4 469 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 KANK3Q6NY19 840 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 POTEGQ6S5H5 508 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 CDR2LQ86X02 465 aaPredicted RBP23.31■■□□□ 1.32
VSX1-206ENST00000444511 ZBTB8OSQ8IWT0 167 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 FBXO18Q8NFZ0 1043 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 SFXN1Q9H9B4 322 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 SH2B1Q9NRF2 756 aaPredicted RBP23.31■■□□□ 1.32
VSX1-206ENST00000444511 MARCH5Q9NX47 278 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 TECTAO75443 2155 aa23.31■■□□□ 1.32
VSX1-206ENST00000444511 C2CD4DB7Z1M9 353 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 AKAP5P24588 427 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 RPA1P27694 616 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 CLCN4P51793 760 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 DSC1Q08554 894 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 TMC5Q6UXY8 1006 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 NOSTRINQ8IVI9 506 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 PRIMPOLQ96LW4 560 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 HERC2P3Q9BVR0 1158 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 PRMT7Q9NVM4 692 aaPredicted RBP23.3■■□□□ 1.32
VSX1-206ENST00000444511 MIOSQ9NXC5 875 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 NOL7Q9UMY1 257 aaKnown RBP23.3■■□□□ 1.32
VSX1-206ENST00000444511 SSX2IPQ9Y2D8 614 aa23.3■■□□□ 1.32
VSX1-206ENST00000444511 MUC6Q6W4X9 2439 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 A0A1B0GUA9 196 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 ARHGEF35A5YM69 484 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 LILRB3O75022 631 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 HAUS3Q68CZ6 603 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 FBXL6Q8N531 539 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 TDRD5Q8NAT2 981 aaKnown RBP23.29■■□□□ 1.32
VSX1-206ENST00000444511 KREMEN2Q8NCW0 462 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 COLEC11Q9BWP8 271 aa23.29■■□□□ 1.32
VSX1-206ENST00000444511 PARP2Q9UGN5 583 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms