RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 C9IYK1 514 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 OPA1O60313 960 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 KLHL41O60662 606 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TADA3O75528 432 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 CLEC3AO75596 197 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 APBB3O95704 486 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 RPSAP08865 295 aaKnown RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 KRT13P13646 458 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 FERP16591 822 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 CA8P35219 290 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TCF7P36402 384 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 GNL1P36915 607 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 STT3AP46977 705 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 MAPKAPK2P49137 400 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 PPM1FP49593 454 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TUBA1BP68363 451 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ZNF200P98182 395 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ITIH3Q06033 890 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 LRRC41Q15345 812 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 PROSER3Q2NL68 480 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 CWF19L2Q2TBE0 894 aaKnown RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 NBPF8Q3BBV2 869 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ANO1Q5XXA6 986 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 LVRNQ6Q4G3 990 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ATF7IPQ6VMQ6 1270 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TUBA1AQ71U36 451 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ARMC9Q7Z3E5 817 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 VPS52Q8N1B4 723 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 CARNMT1Q8N4J0 409 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TTC39CQ8N584 583 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 SPERTQ8NA61 448 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 USP38Q8NB14 1042 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 MSANTD4Q8NCY6 345 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TRIM58Q8NG06 486 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TSGA13Q96PP4 275 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 HERPUD2Q9BSE4 406 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 CENPOQ9BU64 300 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 HERC2P3Q9BVR0 1158 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TSGA10Q9BZW7 698 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 DNAI2Q9GZS0 605 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 BRD8Q9H0E9 1235 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 MRPL46Q9H2W6 279 aaKnown RBP5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ANTXR1Q9H6X2 564 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 TMEM165Q9HC07 324 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 SMYD2Q9NRG4 433 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 HDAC6Q9UBN7 1215 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 SPO11Q9Y5K1 396 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 MAP3K4Q9Y6R4 1608 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 ROBO2Q9HCK4 1378 aa5.25□□□□□ -1.57
HMGB3P9-201ENST00000441799 SETD5Q9C0A6 1442 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 KIAA0586Q9BVV6 1533 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 KLRG2A4D1S0 409 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 H0YC42 278 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 GOLGA6L19H0YKK7 550 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 PLOD2O00469 737 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 POLR3GO15318 223 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 TTI1O43156 1089 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 NMT2O60551 498 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 DIAPH2O60879 1101 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 TMCC2O75069 709 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 INMTO95050 263 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 PAHP00439 452 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 CYP17A1P05093 508 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 KRT10P13645 584 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 ATF2P15336 505 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 ATF3P18847 181 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 TNFAIP3P21580 790 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RPL13P26373 211 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 MCM5P33992 734 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 CCNFP41002 786 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RXRGP48443 463 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 MRPS35P82673 323 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 PLIN5Q00G26 463 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 APBA1Q02410 837 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 CLCQ05315 142 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 PABPC4Q13310 644 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 PPP2R5CQ13362 524 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RRP12Q5JTH9 1297 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 KAZNQ674X7 775 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 NXNQ6DKJ4 435 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 CRTC3Q6UUV7 619 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 KSR2Q6VAB6 950 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RAPH1Q70E73 1250 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 ERMP1Q7Z2K6 904 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 C14orf80Q86SX3 495 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 ESX1Q8N693 406 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 FNIP1Q8TF40 1166 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 ZNF606Q8WXB4 792 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 JPH3Q8WXH2 748 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 SGCDQ92629 289 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 SLC35B4Q969S0 331 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 EXOC4Q96A65 974 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RBM18Q96H35 190 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 RBM14Q96PK6 669 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 MMADHCQ9H3L0 296 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 SYNCQ9H7C4 482 aa5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 METTL5Q9NRN9 209 aaKnown RBP5.24□□□□□ -1.57
HMGB3P9-201ENST00000441799 CROTQ9UKG9 612 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms