RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 GJD2Q9UKL4 321 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 PIN4Q9Y237 131 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 PAXBP1Q9Y5B6 917 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 A0A1W2PQC6 194 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 ZNF233A6NK53 670 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SLC16A4O15374 487 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 EVI5O60447 810 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 CASQ1P31415 396 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NPEPPSP55786 919 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NLRP11P59045 1033 aaKnown RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 PTK7Q13308 1070 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 RRAGAQ7L523 313 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CD302Q8IX05 232 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 PPP2R3CQ969Q6 453 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 TMEM143Q96AN5 459 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 PANX2Q96RD6 677 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NLRC4Q9NPP4 1024 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SETD4Q9NVD3 440 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 ARVCFO00192 962 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 SGPL1O95470 568 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 ZNF865P0CJ78 1059 aaPredicted RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 TNNI1P19237 187 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CA8P35219 290 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 RFC2P35250 354 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SNX16P57768 344 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 EXOC3L4Q17RC7 722 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 GLB1LQ6UWU2 654 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 METTL23Q86XA0 190 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 EHBP1Q8NDI1 1231 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 BEST2Q8NFU1 509 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 APBB2Q92870 758 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 SEMA6BQ9H3T3 888 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 OLFML3Q9NRN5 406 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 C1orf112Q9NSG2 853 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SLC38A7Q9NVC3 462 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 ATP9AO75110 1047 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 MFAP3LO75121 409 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CCND3P30281 292 aaPredicted RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 SLC8A3P57103 927 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 TTC39CQ8N584 583 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CRYGNQ8WXF5 182 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 PCIF1Q9H4Z3 704 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CEP83Q9Y592 693 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 NUB1Q9Y5A7 615 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 GSTTP1A0A1W2PQM5 241 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 URI1O94763 535 aaPredicted RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 AMHP03971 560 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CLCN3P51790 818 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 PMS1P54277 932 aaKnown RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 ZBED6P86452 979 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SPIRE1Q08AE8 756 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SFMBT2Q5VUG0 894 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 TRIM50Q86XT4 487 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 LRRC71Q8N4P6 559 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 XXYLT1Q8NBI6 393 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 SCFD1Q8WVM8 642 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 APOL6Q9BWW8 343 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 UPF3AQ9H1J1 476 aaKnown RBP7.87□□□□□ -1.15
LSM8-204ENST00000424702 LZTFL1Q9NQ48 299 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 DNAI1Q9UI46 699 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
LSM8-204ENST00000424702 ITIH6Q6UXX5 1313 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 KRT86O43790 486 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 IL18RAPO95256 599 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 F2P00734 622 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 SELPP16109 830 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 KIF5AQ12840 1032 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 ASIC2Q16515 512 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 COBLL1Q53SF7 1204 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 TAPT1Q6NXT6 567 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 C1orf186Q6ZWK4 172 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 INTS8Q75QN2 995 aaKnown RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 HDAC6Q9UBN7 1215 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 ZBTB39O15060 712 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 PFKMP08237 780 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 ITGA4P13612 1032 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 POLR2FP61218 127 aaKnown RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 ZC2HC1CQ53FD0 456 aaPredicted RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 MTHFD1LQ6UB35 978 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 FRMD5Q7Z6J6 570 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 ZNF560Q96MR9 790 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 MCOLN1Q9GZU1 580 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 ATP8B3O60423 1300 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 CCNE2O96020 404 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 CRYBB1P53674 252 aaPredicted RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 MYO1EQ12965 1108 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 ATF7IP2Q5U623 682 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 CCDC70Q6NSX1 233 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 PRPF31Q8WWY3 499 aaKnown RBP7.86□□□□□ -1.15
LSM8-204ENST00000424702 USP6NLQ92738 828 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 CCDC127Q96BQ5 260 aa7.86□□□□□ -1.15
LSM8-204ENST00000424702 PPP1R16BQ96T49 567 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms