RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 LRRIQ4A6NIV6 560 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 TTLL13PA6NNM8 815 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 INPPL1O15357 1258 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 ALDH2P05091 517 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 CTSAP10619 480 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 MUTP22033 750 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 CCT6AP40227 531 aaKnown RBP20.46■□□□□ 0.87
NUP50-207ENST00000424634 PDIA5Q14554 519 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 CDCA2Q69YH5 1023 aaPredicted RBP20.46■□□□□ 0.87
NUP50-207ENST00000424634 IGSF22Q8N9C0 903 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 POP1Q99575 1024 aaKnown RBP20.46■□□□□ 0.87
NUP50-207ENST00000424634 APOL5Q9BWW9 433 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 FZD8Q9H461 694 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 NXF3Q9H4D5 531 aaKnown RBP20.46■□□□□ 0.87
NUP50-207ENST00000424634 UBN1Q9NPG3 1134 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 HCFC2Q9Y5Z7 792 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 TDRD15B5MCY1 1934 aaKnown RBP20.45■□□□□ 0.86
NUP50-207ENST00000424634 ARHGEF35A5YM69 484 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 CARNS1A5YM72 827 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 NRP1O14786 923 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 DCXO43602 365 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 ALADP13716 330 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 RNF135Q8IUD6 432 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 GSTCDQ8NEC7 633 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 ZFP42Q96MM3 310 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 TMEM175Q9BSA9 504 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 APOL6Q9BWW8 343 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
NUP50-207ENST00000424634 KIAA1024Q9UPX6 916 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 FAN1Q9Y2M0 1017 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 IRAK3Q9Y616 596 aa20.45■□□□□ 0.86
NUP50-207ENST00000424634 PP2D1A8MPX8 630 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 LOC730098B7Z3J9 87 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 NPTXRO95502 500 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 AKAP5P24588 427 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 GJB2P29033 226 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 CA8P35219 290 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 MLH1P40692 756 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 HAUS3Q68CZ6 603 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 PPP4R3CPQ6ZMV5 832 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 COLGALT2Q8IYK4 626 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 TBC1D32Q96NH3 1257 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 FAM193BQ96PV7 902 aaPredicted RBP20.44■□□□□ 0.86
NUP50-207ENST00000424634 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 CDH22Q9UJ99 828 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 USP20Q9Y2K6 914 aa20.44■□□□□ 0.86
NUP50-207ENST00000424634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 EDN1P05305 212 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 CDC25AP30304 524 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 SCNN1GP51170 649 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 DSC1Q08554 894 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 FAM187BQ17R55 369 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 SLC27A1Q6PCB7 646 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 CASP10Q92851 521 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 PHF7Q9BWX1 381 aaPredicted RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 TRIM6Q9C030 488 aaPredicted RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 UPF2Q9HAU5 1272 aaKnown RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 DDX19AQ9NUU7 478 aaKnown RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 PRMT7Q9NVM4 692 aaPredicted RBP20.43■□□□□ 0.86
NUP50-207ENST00000424634 MARCH5Q9NX47 278 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 MUTYHQ9UIF7 546 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 GIT1Q9Y2X7 761 aa20.43■□□□□ 0.86
NUP50-207ENST00000424634 F8W810 466 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 LILRB3O75022 631 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 SRGAP2BP0DMP2 458 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 HOXB8P17481 243 aaPredicted RBP20.42■□□□□ 0.86
NUP50-207ENST00000424634 BMS1Q14692 1282 aaKnown RBP20.42■□□□□ 0.86
NUP50-207ENST00000424634 CBX2Q14781 532 aaPredicted RBP20.42■□□□□ 0.86
NUP50-207ENST00000424634 PTPN14Q15678 1187 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 TAS1R1Q7RTX1 841 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 ZBTB8OSQ8IWT0 167 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 SNX29Q8TEQ0 813 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 SLC22A17Q8WUG5 538 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 PRIMPOLQ96LW4 560 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 MMTAG2Q9BU76 263 aaKnown RBP20.42■□□□□ 0.86
NUP50-207ENST00000424634 CCDC113Q9H0I3 377 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 KLK14Q9P0G3 267 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 PRG3Q9Y2Y8 225 aaPredicted RBP20.42■□□□□ 0.86
NUP50-207ENST00000424634 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
NUP50-207ENST00000424634 E9PMD0 336 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 LAD1O00515 517 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 EFEMP2O95967 443 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 SSBP05455 408 aaKnown RBP eCLIP20.41■□□□□ 0.86
NUP50-207ENST00000424634 EPCAMP16422 314 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 PRPHP41219 470 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 NAMPTP43490 491 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 OR1G1P47890 313 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 HERC4Q5GLZ8 1057 aaPredicted RBP20.41■□□□□ 0.86
NUP50-207ENST00000424634 KANK3Q6NY19 840 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 RPGRIP1Q96KN7 1286 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 KIFC3Q9BVG8 833 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 C2orf40Q9H1Z8 148 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 PDZD7Q9H5P4 517 aa20.41■□□□□ 0.86
NUP50-207ENST00000424634 MCM2P49736 904 aa20.4■□□□□ 0.86
NUP50-207ENST00000424634 GIT2Q14161 759 aa20.4■□□□□ 0.86
NUP50-207ENST00000424634 RILPL1Q5EBL4 403 aa20.4■□□□□ 0.86
NUP50-207ENST00000424634 DTHD1Q6ZMT9 781 aa20.4■□□□□ 0.86
NUP50-207ENST00000424634 KCNK18Q7Z418 384 aa20.4■□□□□ 0.86
NUP50-207ENST00000424634 C12orf76Q8N812 135 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms