RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GNAT2P19087 354 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 CASRP41180 1078 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 SCNN1GP51170 649 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 PTH1RQ03431 593 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 DUSP2Q05923 314 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 CRHR2Q13324 411 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 CPEB4Q17RY0 729 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 LSM12Q3MHD2 195 aaKnown RBP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 Q6ZRM9 215 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 FAM83AQ86UY5 434 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 ELOA2Q8IYF1 753 aaPredicted RBP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 MSL3Q8N5Y2 521 aaKnown RBP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 CACTINQ8WUQ7 758 aaKnown RBP5□□□□□ -1.61
HMGB3P23-201ENST00000414981 GPR87Q9BY21 358 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 CSRNP2Q9H175 543 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 PHLDB1Q86UU1 1377 aa5□□□□□ -1.61
HMGB3P23-201ENST00000414981 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 PHF2O75151 1096 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 C1SP09871 688 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 CTSSP25774 331 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 CNGA1P29973 690 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 GZMKP49863 264 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 GJC2Q5T442 439 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 ABHD15Q6UXT9 468 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 DOK3Q7L591 496 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 GLB1L3Q8NCI6 653 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 ATXN2LQ8WWM7 1075 aaKnown RBP4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 FATE1Q969F0 183 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 IL17RAQ96F46 866 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 AHCYL2Q96HN2 611 aaKnown RBP4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 CLCA2Q9UQC9 943 aa4.99□□□□□ -1.61
HMGB3P23-201ENST00000414981 KLRG2A4D1S0 409 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 NPIPB8E9PQR5 432 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 K7ESF4 209 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 DNAJC6O75061 913 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 STC2O76061 302 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 CENPBP07199 599 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 POU3F3P20264 500 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SCAND1P57086 179 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 TMPRSS15P98073 1019 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 DGCR2P98153 550 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 TUBA3CQ13748 450 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 ANO4Q32M45 955 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 TUBA3EQ6PEY2 450 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 FAM180AQ6UWF9 173 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 BTNL9Q6UXG8 535 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 KCNK18Q7Z418 384 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SPATS2Q86XZ4 545 aaKnown RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 CPPED1Q9BRF8 314 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SPC25Q9HBM1 224 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 VTA1Q9NP79 307 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SRRDQ9UH36 339 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 DPP7Q9UHL4 492 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 HS3ST3A1Q9Y663 406 aa4.98□□□□□ -1.61
HMGB3P23-201ENST00000414981 SBNO2Q9Y2G9 1366 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 TMEM127O75204 238 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 CRHR1P34998 444 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 GPR3P46089 330 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 APBA1Q02410 837 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 TOB2Q14106 344 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 MUM1Q2TAK8 710 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 LHFPL2Q6ZUX7 228 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 PDZD4Q76G19 769 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 GPRIN1Q7Z2K8 1008 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 CMIPQ8IY22 773 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 GPR156Q8NFN8 814 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 ATL2Q8NHH9 583 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 EPC1Q9H2F5 836 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 EDARQ9UNE0 448 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 HDAC5Q9UQL6 1122 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 ABCC9O60706 1549 aa4.97□□□□□ -1.61
HMGB3P23-201ENST00000414981 PRAMEF4O60810 478 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 PRKD3O94806 890 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 CFBP00751 764 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 MCM7P33993 719 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 CDK17Q00537 523 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 VPS72Q15906 364 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 OR52N2Q8NGI0 321 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 TSPEARQ8WU66 669 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 CDC5LQ99459 802 aaKnown RBP4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 SCAND2PQ9GZW5 306 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 GREM2Q9H772 168 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 IFT122Q9HBG6 1241 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 GPRC5DQ9NZD1 345 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 TRPS1Q9UHF7 1281 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 SCOCQ9UIL1 159 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 MCM8Q9UJA3 840 aa4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P23-201ENST00000414981 TBKBP1A7MCY6 615 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 GRXCR1A8MXD5 290 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 ITGA10O75578 1167 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms