RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ETNPPLQ8TBG4 499 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 ZBTB45Q96K62 511 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 NLRP4Q96MN2 994 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 C11orf70Q9BRQ4 267 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 DEFB129Q9H1M3 183 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 MRPL42Q9Y6G3 142 aaKnown RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 DNAH12Q6ZR08 3092 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 DDX60LQ5H9U9 1706 aaKnown RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 GOLGA8MH3BSY2 632 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 RUFY4Q6ZNE9 571 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 SLC47A2Q86VL8 602 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 LRRC71Q8N4P6 559 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 RUBCNQ92622 972 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 PWWP2AQ96N64 755 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 FMO2Q99518 471 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 TRIM7Q9C029 511 aa14.4□□□□□ -0.1
COL6A2-204ENST00000409416 CNOT7Q9UIV1 285 aaKnown RBP14.4□□□□□ -0.1
COL6A2-204ENST00000409416 IGSF9BQ9UPX0 1349 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 VIMP08670 466 aaKnown RBP14.39□□□□□ -0.11
COL6A2-204ENST00000409416 CYP3A4P08684 503 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 SOX5P35711 763 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 VAMP7P51809 220 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 SKOR1P84550 965 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 DR1Q01658 176 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 PPATQ06203 517 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 CUL1Q13616 776 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 LNX1Q8TBB1 728 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-204ENST00000409416 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 SYNCQ9H7C4 482 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 LAMB2P55268 1798 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 PITPNM2Q9BZ72 1349 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
COL6A2-204ENST00000409416 OPLAHO14841 1288 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-204ENST00000409416 SREBF1P36956 1147 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 CNTN2Q02246 1040 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 PPP3CAQ08209 521 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 MMS22LQ6ZRQ5 1243 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 KRT35Q92764 455 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 TATDN2Q93075 761 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
COL6A2-204ENST00000409416 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 GJB1P08034 283 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 C10orf88Q9H8K7 445 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 MYOZ2Q9NPC6 264 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 HSPBP1Q9NZL4 362 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 PGK2P07205 417 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 MMEP08473 750 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 HSPA9P38646 679 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 CAP2P40123 477 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 TFAMQ00059 246 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 NT5DC3Q86UY8 548 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 CEP57Q86XR8 500 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 LRRN4Q8WUT4 740 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 APOL6Q9BWW8 343 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 LRRC4CQ9HCJ2 640 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 HACL1Q9UJ83 578 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 MAGED2Q9UNF1 606 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 ANKRD63C9JTQ0 380 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 BCRP11274 1271 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 QARSP47897 775 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 ERFP50548 548 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 ITGB3BPQ13352 177 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 HYIQ5T013 277 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 C15orf52Q6ZUT6 534 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
COL6A2-204ENST00000409416 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
COL6A2-204ENST00000409416 F8VZ95 297 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 LMNB1P20700 586 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 TNFRSF8P28908 595 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 C18orf8Q96DM3 657 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 CYFIP2Q96F07 1278 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 ANKRD62A6NC57 917 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 INO80B-WBP1J3KQ70 363 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 GJC2Q5T442 439 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-204ENST00000409416 PHLDB3Q6NSJ2 640 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 TMEM270Q6UE05 265 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 GDAP1Q8TB36 358 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 SCFD2Q8WU76 684 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 TRAPPC12Q8WVT3 735 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms