RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CCDC28BQ9BUN5 200 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CETPP11597 493 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 TECP42680 631 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 DAB2IPQ5VWQ8 1189 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 RFX8Q6ZV50 586 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 TRMT10CQ7L0Y3 403 aaKnown RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 PRELID2Q8N945 189 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERC3-203ENST00000407637 CLIC5Q9NZA1 410 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 PAIP2BQ9ULR5 123 aaKnown RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 PLCH1Q4KWH8 1693 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 ADGRA3Q8IWK6 1321 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 MAGEB3O15480 346 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 NMT2O60551 498 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 TTLL1O95922 423 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 SLC9A1P19634 815 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 ERFP50548 548 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 GALCP54803 685 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 DSG1Q02413 1049 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 ZNF554Q86TJ5 538 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 SATL1Q86VE3 508 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 NME8Q8N427 588 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 SPIRE2Q8WWL2 714 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 ART4Q93070 314 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 AK8Q96MA6 479 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 PCDHA6Q9UN73 950 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 PCDHA8Q9Y5H6 950 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 GLI3P10071 1580 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 RAD21O60216 631 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 OPHN1O60890 802 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 SPAG7O75391 227 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 OR52Z1P0C646 297 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 GNAT2P19087 354 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 VCAM1P19320 739 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 CHRNA3P32297 505 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 CHKAP35790 457 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 THOC5Q13769 683 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 ZNF568Q3ZCX4 644 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 CCDC137Q6PK04 289 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
HERC3-203ENST00000407637 ZDHHC14Q8IZN3 488 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 PROM2Q8N271 834 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 SPATA5Q8NB90 893 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 SLC35G2Q8TBE7 412 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 CDK5RAP3Q96JB5 506 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 WDR37Q9Y2I8 494 aa13.67□□□□□ -0.22
HERC3-203ENST00000407637 ABCB4P21439 1286 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 LTKP29376 864 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 NPEPPSP55786 919 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 SULT2A1Q06520 285 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 ARMCX6Q7L4S7 300 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 CLNKQ7Z7G1 428 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 ARL10Q8N8L6 244 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 CATSPER2Q96P56 530 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 PODXLO00592 558 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 GSC2O15499 205 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 TPD52L2O43399 206 aaKnown RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 UCHL3P15374 230 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 AMPD1P23109 780 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 GJA8P48165 433 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 GALK1P51570 392 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 NCCRP1Q6ZVX7 275 aaPredicted RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms