RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ANKFY1Q9P2R3 1169 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 YWHABP31946 246 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TATDN2Q93075 761 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 GMCL1Q96IK5 515 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TAAR1Q96RJ0 339 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 MYH1P12882 1939 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 GJB6O95452 261 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 IFNB1P01574 187 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 NOVP48745 357 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 HIBCHQ6NVY1 386 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 STK38LQ9Y2H1 464 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 A6NNZ2 444 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 ATF7P17544 494 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 QARSP47897 775 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 CALR3Q96L12 384 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 DDX23Q9BUQ8 820 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-202ENST00000400555 CYP3A4P08684 503 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 HES6Q96HZ4 224 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 SCN7AQ01118 1682 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ANKRD63C9JTQ0 380 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ACOT2P49753 483 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 JAM2P57087 298 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 MTERF2Q49AM1 385 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ANKS4BQ8N8V4 417 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 SPIRE2Q8WWL2 714 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 MAPK7Q13164 816 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 SNRNP35Q16560 246 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 KYNUQ16719 465 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 RUBCNQ92622 972 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 MXRA8Q9BRK3 442 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 TMEM117Q9H0C3 514 aa13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF70Q9UC06 446 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-202ENST00000400555 THAP12O43422 761 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ATP9AO75110 1047 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ECEL1O95672 775 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ECHS1P30084 290 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 HSPA1LP34931 641 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 MFAP3P55082 362 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TRAF1Q13077 416 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 RASA3Q14644 834 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 SPOPLQ6IQ16 392 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 UGCGQ16739 394 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF365Q70YC5 407 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 DAW1Q8N136 415 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 PRELID2Q8N945 189 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 CTNNAL1Q9UBT7 734 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 GJA3Q9Y6H8 435 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 PLIN4Q96Q06 1357 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 POC1B-GALNT4F8VUJ3 575 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 ADRB2P07550 413 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 CD58P19256 250 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 TNFRSF8P28908 595 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 CIITAP33076 1130 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 PTENP60484 403 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 EEPD1Q7L9B9 569 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 LRRC34Q8IZ02 419 aa13.59□□□□□ -0.23
PPP4R1-202ENST00000400555 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms