RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 N4BP3O15049 544 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 SLC26A4O43511 780 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 BMP1P13497 986 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 CA8P35219 290 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.68
UPK3A-202ENST00000396082 MLH1P40692 756 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 NRIP1P48552 1158 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 ERVFC1P60507 584 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 CEBPZQ03701 1054 aaKnown RBP19.3■□□□□ 0.68
UPK3A-202ENST00000396082 RAD51AP2Q09MP3 1159 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 LEXMQ3ZCV2 418 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 TMEM119Q4V9L6 283 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 PDE12Q6L8Q7 609 aaKnown RBP19.3■□□□□ 0.68
UPK3A-202ENST00000396082 UHRF1Q96T88 793 aaPredicted RBP19.3■□□□□ 0.68
UPK3A-202ENST00000396082 GAD1Q99259 594 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 TIPINQ9BVW5 301 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 ZSCAN16Q9H4T2 348 aaPredicted RBP19.3■□□□□ 0.68
UPK3A-202ENST00000396082 TLE6Q9H808 572 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 MYH11P35749 1972 aa19.3■□□□□ 0.68
UPK3A-202ENST00000396082 ACKR2O00590 384 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 PLA2G4BP0C869 781 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 MARCKSP29966 332 aaPredicted RBP19.29■□□□□ 0.68
UPK3A-202ENST00000396082 NDUFV1P49821 464 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
UPK3A-202ENST00000396082 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 TMC7Q7Z402 723 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 SYT2Q8N9I0 419 aaPredicted RBP19.29■□□□□ 0.68
UPK3A-202ENST00000396082 CCDC113Q9H0I3 377 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 KMT5AQ9NQR1 393 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 DNAJB4Q9UDY4 337 aa19.29■□□□□ 0.68
UPK3A-202ENST00000396082 TDRD15B5MCY1 1934 aaKnown RBP19.29■□□□□ 0.68
UPK3A-202ENST00000396082 ARL5CA6NH57 179 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 K7ERI5 159 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 AKAP5P24588 427 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 NPTX2P47972 431 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 AFF1P51825 1210 aaKnown RBP19.28■□□□□ 0.68
UPK3A-202ENST00000396082 GRIN1Q05586 938 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 DHX8Q14562 1220 aaKnown RBP19.28■□□□□ 0.68
UPK3A-202ENST00000396082 ZNF280BQ86YH2 543 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 DAW1Q8N136 415 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 RPS6KC1Q96S38 1066 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 NGRNQ9NPE2 291 aaKnown RBP19.28■□□□□ 0.68
UPK3A-202ENST00000396082 KCND2Q9NZV8 630 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
UPK3A-202ENST00000396082 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 TTLL13PA6NNM8 815 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 FSCN2O14926 492 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 PER2O15055 1255 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 LINC01565O15544 149 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 GALTP07902 379 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 SLC11A1P49279 550 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 SCNN1GP51170 649 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 SLC12A3P55017 1021 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 SMC1AQ14683 1233 aaKnown RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 COL19A1Q14993 1142 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 KARSQ15046 597 aaKnown RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 PTPAQ15257 358 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 PUS10Q3MIT2 529 aaKnown RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 PTCRAQ6ISU1 281 aaPredicted RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 APBB1IPQ7Z5R6 666 aaPredicted RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 IGSF21Q96ID5 467 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 ZFP42Q96MM3 310 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 NECAB3Q96P71 396 aaPredicted RBP19.27■□□□□ 0.68
UPK3A-202ENST00000396082 TMEM175Q9BSA9 504 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 C17orf75Q9HAS0 396 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 FAM50BQ9Y247 325 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 FAN1Q9Y2M0 1017 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 REV3LO60673 3130 aa19.27■□□□□ 0.68
UPK3A-202ENST00000396082 MYH15Q9Y2K3 1946 aa19.27■□□□□ 0.67
UPK3A-202ENST00000396082 FSD2A1L4K1 749 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 SFI1A8K8P3 1242 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 TBX10O75333 385 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 DDHD2O94830 711 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 ALDH2P05091 517 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 KRT18P05783 430 aaKnown RBP19.26■□□□□ 0.67
UPK3A-202ENST00000396082 PLCG1P19174 1290 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 TXLNAP40222 546 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 MAPK7Q13164 816 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 CLUL1Q15846 466 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 CTC1Q2NKJ3 1217 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 ATF7IP2Q5U623 682 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 TMEM173Q86WV6 379 aaPredicted RBP19.26■□□□□ 0.67
UPK3A-202ENST00000396082 VPS52Q8N1B4 723 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 EFHBQ8N7U6 833 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 TMEM87AQ8NBN3 555 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.26■□□□□ 0.67
UPK3A-202ENST00000396082 USP28Q96RU2 1077 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 CDCA3Q99618 268 aaPredicted RBP19.26■□□□□ 0.67
UPK3A-202ENST00000396082 KLK14Q9P0G3 267 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 CCDC39Q9UFE4 941 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 KCNG1Q9UIX4 513 aa19.26■□□□□ 0.67
UPK3A-202ENST00000396082 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
UPK3A-202ENST00000396082 SLC16A4O15374 487 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 B4GALT3O60512 393 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 NR1I2O75469 434 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms