RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 IFT20Q8IY31 132 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SPATA18Q8TC71 538 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 FBXO41Q8TF61 875 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SEPT8Q92599 483 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 KIFAP3Q92845 792 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ZSCAN31Q96LW9 406 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 LRGUKQ96M69 825 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CCDC42Q96M95 316 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SAMD11Q96NU1 681 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 DIRC2Q96SL1 478 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TIPINQ9BVW5 301 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TRIM55Q9BYV6 548 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 IFIH1Q9BYX4 1025 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TRIM8Q9BZR9 551 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 KLHL4Q9C0H6 718 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SAP130Q9H0E3 1048 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 EPB41L4BQ9H329 900 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CNOT10Q9H9A5 744 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 PALMDQ9NP74 551 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 IGSF5Q9NSI5 407 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ARMC1Q9NVT9 282 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 EMC3Q9P0I2 261 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SRRDQ9UH36 339 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SERPINA10Q9UK55 444 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 FAM32AQ9Y421 112 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 C2CD2Q9Y426 696 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ARHGEF12Q9NZN5 1544 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CASZ1Q86V15 1759 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 DNMBPQ6XZF7 1577 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 NUP155O75694 1391 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 TMEM94Q12767 1356 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 USP47Q96K76 1375 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 PTPN23Q9H3S7 1636 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 KDM6AO15550 1401 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ADGRL3Q9HAR2 1447 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 TMEM265A0A087WTH1 108 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ARHGAP10A1A4S6 786 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 TRIM43BA6NCK2 446 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 AKR1B15C9JRZ8 316 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 GOLGA8MH3BSY2 632 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 HIP1O00291 1037 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ETV2O00321 342 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CETN3O15182 167 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SLC26A4O43511 780 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SKAP2O75563 359 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ESRRBO95718 433 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ECDO95905 644 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 NAT2P11245 290 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SRFP11831 508 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ZNF12P17014 697 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ENDOUP21128 410 aaKnown RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 IL10P22301 178 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ENPP1P22413 925 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 HMOX2P30519 316 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SERPINB6P35237 376 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CD96P40200 585 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CETN2P41208 172 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ACADSBP45954 432 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 GPC3P51654 580 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 GUCY2FP51841 1108 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 KIF11P52732 1056 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 THOP1P52888 689 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CCZ1BP86790 482 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CCZ1P86791 482 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 DNM1Q05193 864 aaKnown RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 MYO1EQ12965 1108 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 DCTN2Q13561 401 aaKnown RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 PUM1Q14671 1186 aaKnown RBP eCLIP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CNGA2Q16280 664 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 INSCQ1MX18 579 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ANO4Q32M45 955 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ALDH1L2Q3SY69 923 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CEP78Q5JTW2 689 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SPDYAQ5MJ70 313 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CCNJQ5T5M9 372 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 RNF187Q5TA31 235 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ZNF658Q5TYW1 1059 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 FYB2Q5VWT5 728 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SLC4A10Q6U841 1118 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 RUFY4Q6ZNE9 571 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ZNF804AQ7Z570 1209 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 TTC30AQ86WT1 665 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 DDX42Q86XP3 938 aaKnown RBP eCLIP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 WDR75Q8IWA0 830 aaKnown RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 CD302Q8IX05 232 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SLC15A3Q8IY34 581 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 SCYL3Q8IZE3 742 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 TRIML2Q8N7C3 387 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ARL10Q8N8L6 244 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ABTB2Q8N961 1025 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 IGSF22Q8N9C0 903 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 MARCH10Q8NA82 808 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 PPFIBP2Q8ND30 876 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 DDHD1Q8NEL9 900 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 LILRB1Q8NHL6 650 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ANGPTL6Q8NI99 470 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 GSDMBQ8TAX9 411 aa3.88□□□□□ -1.79
XRCC4-203ENST00000396027 ZFPM2Q8WW38 1151 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms