RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 H0YCG3 227 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 KCNK3O14649 394 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 EDNRBP24530 442 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ALDH5A1P51649 535 aaPredicted RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 CYP24A1Q07973 514 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 FSTL1Q12841 308 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 PRKG1Q13976 671 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 PEX26Q7Z412 305 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 GSPT2Q8IYD1 628 aaKnown RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 RASGEF1CQ8N431 466 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 METTL13Q8N6R0 699 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 CTNNBL1Q8WYA6 563 aaPredicted RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 SHC3Q92529 594 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 SEMA4DQ92854 862 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
TDP1-202ENST00000393452 KREMEN1Q96MU8 473 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ISCUQ9H1K1 167 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 OSGEPQ9NPF4 335 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 GDF3Q9NR23 364 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 TAS2R14Q9NYV8 317 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 BTBD7Q9P203 1132 aa9.79□□□□□ -0.84
TDP1-202ENST00000393452 ZNFX1Q9P2E3 1918 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 BUB1BO60566 1050 aaPredicted RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 SCP2P22307 547 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 DNA2P51530 1060 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 EPHB4P54760 987 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 SP4Q02446 784 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 EMBQ6PCB8 327 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 CYFIP1Q7L576 1253 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 DAAM2Q86T65 1068 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 ANKRD35Q8N283 1001 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 FAM71BQ8TC56 605 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 EPS8L1Q8TE68 723 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 SLC20A1Q8WUM9 679 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 POMGNT1Q8WZA1 660 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 KAT5Q92993 513 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 IFT74Q96LB3 600 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 CEP89Q96ST8 783 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 POLR3FQ9H1D9 316 aaPredicted RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 ADARB2Q9NS39 739 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 STYXL1Q9Y6J8 313 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 LRRC37A2A6NM11 1700 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 HNRNPDLO14979 420 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 DDNO94850 711 aaPredicted RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 GLI1P08151 1106 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 GZMAP12544 262 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 CLDN10P78369 228 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 MRPS25P82663 173 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 MAP2K1Q02750 393 aaPredicted RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 EMC2Q15006 297 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 DLK2Q6UY11 383 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 USP37Q86T82 979 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 RHOT2Q8IXI1 618 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 GPD1LQ8N335 351 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 FBXL13Q8NEE6 735 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 CCDC127Q96BQ5 260 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 ARHGEF26Q96DR7 871 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.78□□□□□ -0.842e-6■■□□□ 12.6
TDP1-202ENST00000393452 NIFKQ9BYG3 293 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 THAP2Q9H0W7 228 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 ZNF302Q9NR11 478 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 NOCTQ9UK39 431 aaKnown RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 ADAM21Q9UKJ8 722 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
TDP1-202ENST00000393452 CSADQ9Y600 493 aa9.78□□□□□ -0.84
TDP1-202ENST00000393452 A0A0G2JLL6 359 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 TMCO5BA8MYB1 307 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 IRF6O14896 467 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 SYF2O95926 243 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 OATP04181 439 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 CHRNB2P17787 502 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 ABCB4P21439 1286 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 CYP2C19P33261 490 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 TNNT3P45378 269 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 MFAP3P55082 362 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 TNNC1P63316 161 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 PRPF4BQ13523 1007 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 MTERF2Q49AM1 385 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 C15orf39Q6ZRI6 1047 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 PRRT2Q7Z6L0 340 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 IFT20Q8IY31 132 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 TAS1R2Q8TE23 839 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 CAVIN3Q969G5 261 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 POP1Q99575 1024 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 PORCNQ9H237 461 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 BHMG1C9JSJ3 638 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 PGRMC1O00264 195 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 KIAA0391O15091 583 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 PEX10O60683 326 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 FARP2O94887 1054 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 HEXIM1O94992 359 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms